T=3 icosahedral capsid protein


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The capsid is composed 60 asymmetric units made of 3 protein (T=3), for a total of 180 capsid proteins.



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Icosahedric triangulation number is calculated following Caspar and Klug system

Matching UniProtKB/Swiss-Prot entries

135 entries grouped by strain (browse by keywords)

1 entry

Alfalfa mosaic virus (strain 425 / isolate Leiden) reference strain

CAPSD_AMVLE Capsid protein (CP) (Coat protein)

1 entry

Bacillus phage PZA (Bacteriophage PZA) reference strain

CAPSD_BPPZA Major capsid protein (Gene product 8) (gp8) (Major head protein) (Protein p8)

1 entry

Bacillus phage phi29 (Bacteriophage phi-29) reference strain

CAPSD_BPPH2 Major capsid protein (Gene product 8) (gp8) (Major head protein) (Protein p8)

1 entry

Barley yellow dwarf virus (isolate MAV-PS1) (BYDV) reference strain

CAPSD_BYDV1 Major capsid protein (Coat protein) (CP)

1 entry

Barley yellow dwarf virus (isolate PAV) (BYDV) reference strain

CAPSD_BYDVP Major capsid protein (Coat protein) (CP)

1 entry

Broad bean mottle virus reference strain

CAPSD_BBMV Capsid protein (CP) (Coat protein)

1 entry

Broad bean wilt virus 1 (strain Spinach/United States/ATCC PV-132/1963) (BBWV-1) reference strain

POL2_BBWVS RNA2 polyprotein (119kDa protein) (Genome polyprotein M) [Cleaved into: VP53 (53 kDa protein); ...

1 entry

Brome mosaic virus (BMV) reference strain

CAPSD_BMV Capsid protein (CP) (Coat protein)

1 entry

Carnation mottle virus (CarMV) reference strain

CAPSD_CARMV Capsid protein (Coat protein) (p38)

1 entry

Carnation mottle virus (isolate China/Shanghai) (CarMV) reference strain

CAPSD_CARMS Capsid protein (Coat protein) (p38)

1 entry

Carnation ringspot virus (isolate Lommel) (CRSV) reference strain

CAPSD_CRSVL Capsid protein (Coat protein)

1 entry

Cocksfoot mottle virus (isolate Dactylis glomerata/Norway/CfMV-NO/1995) (CfMV) reference strain

CAPSD_CFMVN Capsid protein (CP) (Coat protein) (Protein P4)

1 entry

Cowpea mosaic virus (strain SB) (CPMV) reference strain

POL2_CPMVS RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Cucumber mosaic virus (strain FNY) (CMV) reference strain

CAPSD_CMVFN Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Q) (CMV) reference strain

CAPSD_CMVQ Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage GA (Bacteriophage GA) reference strain

CAPSD_BPGA Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage MX1 (Bacteriophage MX1) reference strain

CAPSD_BPMX1 Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage SP (Bacteriophage SP) reference strain

CAPSD_BPSP Capsid protein (CP) (Coat protein)

1 entry

Escherichia phage MS2 (Bacteriophage MS2) reference strain

CAPSD_BPMS2 Capsid protein (CP) (Coat protein)

1 entry

Escherichia phage Qbeta (Bacteriophage Q-beta) reference strain

CAPSD_BPQBE Capsid protein (CP) (Coat protein)

1 entry

Feline calicivirus (strain Cat/United States/Urbana/1960) (FCV) reference strain

CAPSD_FCVUR Capsid protein (Coat protein) (CP) [Cleaved into: Protein 40k]

1 entry

Grapevine fleck virus (isolate Italy/MT48) (GFkV) reference strain

CAPSD_GFKVM Capsid protein (CP) (Coat protein)

1 entry

Human astrovirus-1 (HAstV-1) reference strain

CAPSD_HASV1 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human picobirnavirus (strain Human/Thailand/Hy005102/-) (PBV) reference strain

CAPSD_HPBVH Capsid protein precursor [Cleaved into: 7 kDa polypeptide; Capsid protein (CP)]

1 entry

Maize chlorotic mottle virus (isolate United States/Kansas/1987) (MCMV) reference strain

CAPSD_MCMVK Capsid protein (Coat protein) (p25)

1 entry

Melon necrotic spot virus (MNSV) reference strain

CAPSD_MNSV Capsid protein (Coat protein) (p42)

1 entry

Nodamura virus (strain Mag115) (NoV) reference strain

CAPSD_NODAM Capsid protein alpha [Cleaved into: Capsid protein beta (EC 3.4.23.44) (Coat protein beta) ...

1 entry

Norwalk virus (strain GI/Human/United States/Norwalk/1968) (Hu/NV/NV/1968/US) reference strain

CAPSD_NVN68 Capsid protein VP1 (CP) (p59) [Cleaved into: Soluble capsid protein (Protein 30k) (p30)]

1 entry

Oat chlorotic stunt virus (isolate United Kingdom) (OCSV) reference strain

CAPSD_OCSVU Capsid protein (p48)

1 entry

Olive latent virus 2 (isolate Italy) (OLV-2) reference strain

CAPSD_OLV2I Capsid protein (CP) (Coat protein)

1 entry

Panicum mosaic virus (strain United States/Kansas 109S) (PMV) reference strain

CAPSD_PMVK Capsid protein (Coat protein) (p26)

1 entry

Pea enation mosaic virus-1 (strain WSG) (PEMV-1) reference strain

CAPSD_PEMVW Major capsid protein (Coat protein) (CP)

1 entry

Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) reference strain

CAPSD_PZSVT Capsid protein (CP) (Coat protein)

1 entry

Poinsettia latent virus (isolate Euphorbia pulcherrima/Germany/Siepen/2005) (PnLV) (Poinsettia cryptic virus) reference strain

CAPSD_PNLV Capsid protein (CP) (Coat protein)

1 entry

Potato leafroll virus (strain Potato/Netherlands/Wageningen/1989) (PLrV) reference strain

CAPSD_PLRVW Major capsid protein (Coat protein) (CP)

1 entry

Potato leafroll virus (strain Potato/Scotland/strain 1/1984) (PLrV) reference strain

CAPSD_PLRV1 Major capsid protein (Coat protein) (CP)

1 entry

Pothos latent virus (isolate Pigeonpea/India) (PoLV) reference strain

CAPSD_POLVP Capsid protein (p40)

1 entry

Red clover necrotic mosaic virus (RCNMV) reference strain

CAPSD_RCNMV Capsid protein (Coat protein)

1 entry

Southern bean mosaic virus (isolate Bean/United States/Arkansas) (SBMV) reference strain

CAPSD_SBMVA Capsid protein (CP) (Coat protein)

1 entry

Southern cowpea mosaic virus (SCPMV) (Southern bean mosaic virus (strain cowpea)) reference strain

CAPSD_SCPMV Capsid protein (Coat protein)

1 entry

Striped jack nervous necrosis virus (SjNNV) reference strain

CAPSD_SJNNV Capsid protein alpha

1 entry

Tobacco necrosis virus (strain A) (TNV-A) reference strain

CAPSD_TNVA Capsid protein (p30)

1 entry

Tobacco streak virus (strain WC) (TSV) reference strain

CAPSD_TOBSV Capsid protein (CP) (Coat protein)

1 entry

Tomato aspermy virus (TAV) reference strain

CAPSD_TAV Capsid protein (CP) (Coat protein)

1 entry

Tomato bushy stunt virus (strain Cherry) (TBSV) reference strain

CAPSD_TBSVC Capsid protein (Coat protein) (p41)

1 entry

Turnip crinkle virus (TCV) reference strain

CAPSD_TCV Capsid protein (Coat protein) (p38)

1 entry

Turnip yellow mosaic virus reference strain

COAT_TYMV Coat protein (Virion protein)

1 entry

Turnip yellows virus (isolate FL-1) (TuYV) (BWYV-FL1) reference strain

CAPSD_TYYVF Major capsid protein (Coat protein) (CP)

1 entry

Vesicular exanthema of swine virus serotype A48 (isolate Swine/United States/A48/1948) (VESV) reference strain

CAPSD_VESVA Capsid protein (CP) (Coat protein) (VP1)

1 entry

Alfalfa mosaic virus (strain 425 / isolate Madison)

CAPSD_AMVMA Capsid protein (CP) (Coat protein)

1 entry

Alfalfa mosaic virus (strain Strasbourg)

CAPSD_AMVST Capsid protein (CP) (Coat protein)

1 entry

Alfalfa mosaic virus (strain YSMV)

CAPSD_AMVYS Capsid protein (CP) (Coat protein)

1 entry

Andean potato mottle virus (APMV)

POL2_APMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Artichoke mottled crinkle virus (AMCV)

CAPSD_AMCV Capsid protein (Coat protein) (p41)

1 entry

Bacillus phage B103 (Bacteriophage B103)

CAPSD_BPB03 Major capsid protein (Gene product 8) (gp8) (Major head protein) (Protein p8)

1 entry

Barley yellow dwarf virus (isolate MAV) (BYDV)

CAPSD_BYDVM Major capsid protein (Coat protein) (CP)

1 entry

Barley yellow dwarf virus (isolate NY-RPV) (BYDV)

CAPSD_BYDVN Major capsid protein (Coat protein) (CP)

1 entry

Barley yellow dwarf virus (isolate P-PAV) (BYDV)

CAPSD_BYDVR Major capsid protein (Coat protein) (CP)

1 entry

Bean leafroll virus (BLRV)

CAPSD_BLRV Major capsid protein (Coat protein) (CP)

1 entry

Bean-pod mottle virus (strain Kentucky G7) (BPMV)

POL2_BPMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Belladonna mottle virus (BMDV)

COAT_BMDV Coat protein (Virion protein)

1 entry

Black beetle virus (BBV)

CAPSD_BBV Capsid protein alpha [Cleaved into: Capsid protein beta (EC 3.4.23.44) (Coat protein beta) ...

1 entry

Boolarra virus (BoV)

CAPSD_BOOLV Capsid protein alpha [Cleaved into: Capsid protein beta (EC 3.4.23.44) (Coat protein beta) ...

1 entry

Broad bean wilt virus 2 (BBWV-2)

POL2_BBWV2 RNA2 polyprotein (119kDa protein) (Genome polyprotein M) [Cleaved into: VP53 (53 kDa protein); ...

1 entry

Cacao yellow mosaic virus

COAT_CAYMV Coat protein (Virion protein)

1 entry

Canine calicivirus (strain 48) (CaCV)

CAPSD_CACV4 Capsid protein (Coat protein) (CP) (VP1)

1 entry

Cowpea chlorotic mottle virus (CCMV)

CAPSD_CCMV Capsid protein (CP) (Coat protein)

1 entry

Cowpea severe mosaic virus (strain DG) (CPSMV)

POL2_CPSMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Cucumber mosaic virus (strain As) (CMV)

CAPSD_CMVAS Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Banana) (CMV)

CAPSD_CMVBA Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain C) (CMV)

CAPSD_CMVC Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain C7-2) (CMV)

CAPSD_CMVC7 Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain CS) (CMV)

CAPSD_CMVCS Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain DKRD) (CMV)

CAPSD_CMVDK Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain E5) (CMV)

CAPSD_CMVE5 Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain FC) (CMV)

CAPSD_CMVFC Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain FT) (CMV)

CAPSD_CMVFT Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain I17F) (CMV)

CAPSD_CMVI1 Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Iizuka) (CMV)

CAPSD_CMVII Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Ixora) (CMV)

CAPSD_CMVIX Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Kin) (CMV)

CAPSD_CMVKI Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Kor) (CMV)

CAPSD_CMVKO Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain M) (CMV)

CAPSD_CMVM Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain M48) (CMV)

CAPSD_CMVM4 Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain N) (CMV)

CAPSD_CMVN Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain NT9) (CMV)

CAPSD_CMVNT Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain O) (CMV)

CAPSD_CMVO Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain P6) (CMV)

CAPSD_CMVP6 Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Pepo) (CMV)

CAPSD_CMVPE Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain S) (CMV)

CAPSD_CMVS Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Trk7) (CMV)

CAPSD_CMVTR Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain WL) (CMV)

CAPSD_CMVWL Capsid protein (CP) (Coat protein)

1 entry

Cucumber mosaic virus (strain Y) (CMV)

CAPSD_CMVY Capsid protein (CP) (Coat protein)

1 entry

Cucumber necrosis virus (CNV)

CAPSD_CNV Capsid protein (Coat protein) (p41)

1 entry

Cymbidium ringspot virus (CymRSV)

CAPSD_CRV Capsid protein (Coat protein) (p41)

1 entry

Eggplant mosaic virus

COAT_EPMV Coat protein (Virion protein)

1 entry

Enterobacteria phage JP34 (Bacteriophage JP34)

CAPSD_BPJP3 Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage R17 (Bacteriophage R17)

CAPSD_BPR17 Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage ZR (Bacteriophage ZR)

CAPSD_BPZR Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage f2 (Bacteriophage f2)

CAPSD_BPF2 Capsid protein (CP) (Coat protein)

1 entry

Enterobacteria phage fr (Bacteriophage fr)

CAPSD_BPFR Capsid protein (CP) (Coat protein)

1 entry

Erysimum latent virus (ELV)

COAT_ELV Coat protein (Virion protein)

1 entry

Feline calicivirus (strain CFI/68 FIV) (FCV)

CAPSD_FCVC6 Capsid protein (Coat protein) (CP) (VP1) [Cleaved into: Protein 40k]

1 entry

Feline calicivirus (strain F9) (FCV)

CAPSD_FCVF9 Capsid protein (Coat protein) (CP) (VP1) [Cleaved into: Protein 40k]

1 entry

Feline calicivirus (strain Japanese F4) (FCV)

CAPSD_FCVF4 Capsid protein (Coat protein) (CP) (VP1) [Cleaved into: Protein 40k]

1 entry

Flock house virus (FHV)

CAPSD_FHV Capsid protein alpha [Cleaved into: Capsid protein beta (EC 3.4.23.44) (Coat protein beta) ...

1 entry

Human astrovirus-2 (HAstV-2)

CAPSD_HASV2 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human astrovirus-3 (HAstV-3)

CAPSD_HASV3 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human astrovirus-4 (HAstV-4)

CAPSD_HASV4 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human astrovirus-5 (HAstV-5)

CAPSD_HASV5 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human astrovirus-6 (HAstV-6)

CAPSD_HASV6 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human astrovirus-7 (HAstV-7)

CAPSD_HASV7 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Human astrovirus-8 (HAstV-8)

CAPSD_HASV8 Capsid polyprotein VP90 [Cleaved into: Capsid polyprotein VP70; Capsid protein VP34; Capsid protein ...

1 entry

Kennedya yellow mosaic virus (strain Jervis bay) (KYMV)

COAT_KYMVJ Coat protein (Virion protein)

1 entry

Lordsdale virus (strain GII/Human/United Kingdom/Lordsdale/1993) (Human enteric calicivirus) (Hu/NV/LD/1993/UK)

CAPSD_LORDV Capsid protein (CP) (VP1) [Cleaved into: Soluble capsid protein]

1 entry

Mink astrovirus 1 (MAstV-1)

CAPSD_MASV1 Capsid polyprotein VP90

1 entry

Ononis yellow mosaic virus

COAT_OYMV Coat protein (Virion protein)

1 entry

Ovine astrovirus 1 (OAstV-1)

CAPSD_OASV1 Capsid polyprotein VP90

1 entry

Pariacoto virus (PaV)

CAPSD_PAV Capsid protein alpha [Cleaved into: Capsid protein beta (EC 3.4.23.44) (Coat protein beta) ...

1 entry

Peanut stunt virus (strain J) (PSV)

CAPSD_PSVJ Capsid protein (CP) (Coat protein)

1 entry

Physalis mottle virus (PhMV) (Belladonna mottle virus-Iowa)

COAT_PHMV Coat protein (Virion protein)

1 entry

Porcine astrovirus 1 (PAstV-1)

CAPSD_PASV1 Capsid polyprotein VP90

1 entry

Potato leafroll virus (PLrV)

CAPSD_PLRV Major capsid protein (Coat protein) (CP)

1 entry

Potato leafroll virus (strain Potato/Canada/Rowhani/1979) (PLrV)

CAPSD_PLRVR Major capsid protein (Coat protein) (CP)

1 entry

Pseudomonas phage PP7 (Bacteriophage PP7)

COAT_BPPP7 Coat protein

1 entry

Pseudomonas phage PRR1 (Bacteriophage PRR1)

COAT_BPPRR Coat protein

1 entry

Rabbit calicivirus (Ra/LV/RHDV/RCV/1995/IT) (RHDV)

CAPSD_RHDVR Subgenomic capsid protein VP60

1 entry

Red clover mottle virus (RCMV)

POL2_RCMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1)

CAPSD_SMSV1 Capsid protein (Coat protein) (CP) (VP1)

1 entry

San Miguel sea lion virus serotype 4 (SMSV-4) (SMSV serotype 4)

CAPSD_SMSV4 Capsid protein (Coat protein) (CP) (VP1)

1 entry

Southampton virus (strain GI/Human/United Kingdom/Southampton/1991) (SHV) (Hu/NV/SHV/1991/UK)

CAPSD_SOUV3 Capsid protein VP1 (CP) [Cleaved into: Soluble capsid protein]

1 entry

Squash mosaic virus (strain melon) (SqMV)

POL2_SQMVM RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Tobacco necrosis virus (strain D) (TNV-D)

CAPSD_TNVD Capsid protein (p30)

1 entry

Tomato bushy stunt virus (strain BS-3) (TBSV)

CAPSD_TBSVB Capsid protein (Coat protein) (p41)

1 entry

Turnip yellow mosaic virus (isolate Australia)

COAT_TYMVA Coat protein (Virion protein)