T=pseudo3 icosahedral capsid protein (kw:KW-1143)

The capsid is composed 60 asymmetric units made of 3 protein (T=3), for a total of 180 capsid proteins. These capsids are not T=3 symmetry as described by Caspar and Klug

because the basic unit is composed of three different proteins. Since the three subunits are morphologically very similar, the structure is therefore a pseudo T=3.

Icosahedric triangulation number is calculated following Caspar and Klug system

Comovirus, Fabavirus and Nepovirus share the same pseudo T=3 structure, eventhough subunits are not all processed.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

83 entries grouped by protein

reorder by strain

83 entries

Genome polyprotein

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POLG_AIVA8

Aichi virus (strain Human/A846/88/1989) (AiV) (Aichi virus (strain A846/88)) reference strain

5AOO; 5GKA; 5LVC; 5LZ3; 7ZV1; 7ZV6

POLG_COSAA

Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A) reference strain

POLG_EMCVR

Encephalomyocarditis virus (strain Rueckert) (EMCV) reference strain

POLG_FMDVO

Foot-and-mouth disease virus serotype O (FMDV) reference strain

1QMY; 1QOL; 1QQP; 2JQF; 2JQG; 4QBB; 6FFA

POLG_HAVHM

Human hepatitis A virus genotype IB (isolate HM175) (HHAV) (Human hepatitis A virus (isolate Human/Australia/HM175/1976)) reference strain

1HAV; 1QA7; 2H6M; 2H9H; 2HAL; 4QPG; 4QPI; 4WZN; 5WTE; 5WTF; 5WTH; 7XT3

POLG_HPE2W

Human parechovirus 2 (strain Williamson) (HPeV-2) (Echovirus 23) reference strain

POLG_HRV8A

Human rhinovirus A serotype 89 (strain 41467-Gallo) (HRV-89) reference strain

POLG_POL1M

Poliovirus type 1 (strain Mahoney) reference strain

1AL2; 1AR6; 1AR7; 1AR8; 1AR9; 1ASJ; 1DGI; 1FPT; 1HXS; 1L1N; 1NG7; 1NN8; 1PO1; 1PO2; 1POV; 1RA6; 1RA7; 1RAJ; 1RDR; 1TQL; 1VBD; 1XYR; 2BBL; 2BBP; 2IJD; 2IJF; 2ILY; 2ILZ; 2IM0; 2IM1; 2IM2; 2IM3; 2PLV; 3EPC; 3IYB; 3IYC; 3J3O; 3J3P; 3J48; 3J8F; 3J9F; 3JBC; 3JBD; 3JBE; 3JBF; 3JBG; 3OL7; 4DCD; 4K4S; 4K4T; 4K4U; 4K4V; 4K4W; 4NLO; 4NLP; 4NLQ; 4NLR; 4NLS; 4NLT; 4NLU; 4NLV; 4NLW; 4NLX; 4NLY; 4R0E; 5KTZ; 5KU0; 5KU2; 5KWL; 5Z3Q; 6HLV; 6P9O; 6P9W; 6PSZ; 9FQ2

POLG_SALVA

Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A) reference strain

POLG_SVV1

Seneca Valley virus (isolate -/United States/SSV-001/2002) (SVV) reference strain

3CJI; 6ADL; 6CX1; 6L0T

POLG_BOVEV

Bovine enterovirus (strain VG-5-27) (BEV)

POLG_CX16G

Coxsackievirus A16 (strain G-10)

7H2T; 7H2U; 7H2V; 7H2W; 7H2X; 7H2Y; 7H2Z; 7H30; 7H31; 7H32; 7H33; 7H34; 7H35; 7H36; 7H37; 7H38; 7H39; 7H3A; 7H3B; 7H3C; 7H3D; 7H3E; 7H3F; 7H3G; 7H3H; 7H3I; 7H3J; 7H3K; 7H3L; 7H3M; 7H3N; 7H3O; 7H3P; 7H3Q; 7H3R; 7H3S; 7H3T; 7H3U; 7H3V; 7H3W; 7H3X; 7H3Y; 7H3Z; 7H40; 7H41; 7H42; 7H43; 7H44; 7H45; 7H46; 7H47; 7H48; 7H49; 7H4A; 7H4B; 7H4C; 7H4D; 7H4E; 7H4F; 7H4G; 7H4H; 7H4I; 7H4J; 7H4K; 7H4L; 7H4M; 7H4N; 7H4O; 7H4P; 7H4Q; 7H4R; 7H4S; 7H4T; 7H4U; 7H4V; 7H4W; 7H4X; 7H4Y; 7H4Z; 7H50; 7H51; 7H52; 7H53; 7H54; 7H55; 8POA

POLG_CX16T

Coxsackievirus A16 (strain Tainan/5079/98)

4MG3; 5C8C; 6LHT; 7Y7M; 7YMS

POLG_CXA21

Coxsackievirus A21 (strain Coe)

POLG_CXA24

Coxsackievirus A24 (strain EH24/70)

POLG_CXA9

Coxsackievirus A9 (strain Griggs)

POLG_CXB1J

Coxsackievirus B1 (strain Japan)

POLG_CXB2O

Coxsackievirus B2 (strain Ohio-1)

POLG_CXB3N

Coxsackievirus B3 (strain Nancy)

2VB0; 2ZTX; 2ZTY; 2ZTZ; 2ZU1; 2ZU3; 3CDU; 3CDW; 4WFX; 4WFY; 4WFZ; 4Y2A; 6S3A; 6T3W; 7LMS; 7QUW; 7W0Q; 7W0S; 7W0T

POLG_CXB3W

Coxsackievirus B3 (strain Woodruff)

1COV; 1JEW; 3JD7

POLG_CXB4E

Coxsackievirus B4 (strain E2)

POLG_CXB4J

Coxsackievirus B4 (strain JVB / Benschoten / New York/51)

POLG_CXB5P

Coxsackievirus B5 (strain Peterborough / 1954/UK/85)

POLG_CXB6S

Coxsackievirus B6 (strain Schmitt)

POLG_EC01F

Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

POLG_EC05N

Echovirus 5 (strain Noyce)

POLG_EC06C

Echovirus 6 (strain Charles)

POLG_EC09B

Echovirus 9 (strain Barty)

POLG_EC09H

Echovirus 9 (strain Hill)

POLG_EC11G

Echovirus 11 (strain Gregory)

POLG_EC12T

Echovirus 12 (strain Travis)

POLG_EC30B

Echovirus 30 (strain Bastianni)

POLG_EMCV

Encephalomyocarditis virus

POLG_EMCVB

Encephalomyocarditis virus (strain emc-b nondiabetogenic)

POLG_EMCVD

Encephalomyocarditis virus (strain emc-d diabetogenic)

POLG_ENMGO

Mengo encephalomyocarditis virus

1MEC; 2M7Y; 2MEV; 2MMH; 2MMI; 2MMK; 2MML; 4NYZ; 4NZ0; 4Y2C; 4Y3C; 7BNY; 7NWT

POLG_FMDA1

Foot-and-mouth disease virus serotype Asia-1 (FMDV)

POLG_FMDS2

Foot-and-mouth disease virus serotype SAT-2 (FMDV)

POLG_FMDV1

Foot-and-mouth disease virus (strain A10/Holland/1961 serotype A) (FMDV)

1ZBA; 1ZBE; 2BHG; 2J92; 2WV4; 2WV5; 5OWX; 5OYI

POLG_FMDV5

Foot-and-mouth disease virus (isolate -/Germany/A5Westerwald/1951 serotype A) (FMDV)

POLG_FMDVA

Foot-and-mouth disease virus (isolate Bovine/United Kingdom/A12Valle119/1932 serotype A) (FMDV)

POLG_FMDVC

Foot-and-mouth disease virus (isolate Bovine/Brazil/A24Cruzeiro/1955 serotype A) (FMDV)

POLG_FMDVI

Foot-and-mouth disease virus (isolate -/Brazil/C3Indaial/1971 serotype C) (FMDV)

POLG_FMDVP

Foot-and-mouth disease virus (isolate Swine/Taiwan/OTai/1997 serotype O) (FMDV)

POLG_FMDVS

Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C) (FMDV)

1QGC; 4WYL; 4WYW; 4WZM; 4WZQ; 4X2B; 5JXS; 5N8X; 5N95; 6GVV; 6GVY; 6KWK; 6KWL; 6S2L; 8C1N; 8C2P

POLG_FMDVT

Foot-and-mouth disease virus (isolate -/Germany/C1Oberbayen/1960 serotype C) (FMDV)

1EJO; 1FMD; 1QGC

POLG_FMDVZ

Foot-and-mouth disease virus (isolate -/Azerbaijan/A22-550/1965 serotype A) (FMDV)

1FMD; 6A6H; 7D3R; 7FEJ

POLG_HAV88

Human hepatitis A virus genotype IIB (isolate SLF88) (HHAV) (Human hepatitis A virus (isolate Human/Sierra Leone/SLF88/1988))

POLG_HAVCF

Human hepatitis A virus genotype IIA (isolate CF-53) (HHAV) (Human hepatitis A virus (isolate Human/France/CF-53/1979))

POLG_HAVGB

Human hepatitis A virus genotype IA (isolate GBM) (HHAV) (Human hepatitis A virus (isolate Human/Germany/GBM/1976))

POLG_HAVH2

Human hepatitis A virus genotype IA (isolate H2) (HHAV) (Human hepatitis A virus (isolate Human/China/H2/1982))

POLG_HAVJ8

Human hepatitis A virus genotype IIIB (isolate HAJ85-1) (HHAV) (Human hepatitis A virus (isolate Human/Japan/HAJ85-1/1985))

POLG_HAVLA

Human hepatitis A virus genotype IA (isolate LA) (HHAV) (Human hepatitis A virus (isolate Human/Northern California/LA/1974))

POLG_HAVMB

Human hepatitis A virus genotype IB (isolate MBB) (HHAV) (Human hepatitis A virus (isolate Human/Northern Africa/MBB/1978))

POLG_HAVNO

Human hepatitis A virus genotype IIIA (isolate NOR-21) (HHAV) (Human hepatitis A virus (isolate Human/Norway/NOR-21/1998))

POLG_HAVS2

Simian hepatitis A virus genotype V (isolate AGM-27) (SHAV) (Simian hepatitis A virus (isolate Cercopithecus/Kenya/AGM-27/1985))

POLG_HE701

Human enterovirus 70 (strain J670/71) (EV70) (EV-70)

POLG_HE71

Human enterovirus 71 (EV71) (EV-71)

5GQ1; 5GRB; 8A5L

POLG_HE71B

Human enterovirus 71 (strain USA/BrCr/1970) (EV71) (EV-71)

POLG_HE71M

Human enterovirus 71 (strain 7423/MS/87) (EV71) (EV-71)

3W95; 6HLW; 6I2K

POLG_HED68

Human enterovirus D68 (EV68) (EV-68)

4WM7; 4WM8; 5BNN; 5BNO; 5BNP; 6HLN; 6HMV; 7GNV; 7GNW; 7GNX; 7GNY; 7GNZ; 7GO0; 7GO1; 7GO2; 7GO3; 7GO4; 7GO5; 7GO6; 7GO7; 7GO8; 7GO9; 7GOA; 7GOB; 7GOC; 7GOD; 7GOE; 7GOF; 7GOG; 7GOH; 7GOI; 7GOJ; 7GOK; 7GOL; 7GOM; 7GON; 7GOO; 7GOP; 7GOQ; 7GOR; 7GOS; 7GOT; 7GOU; 7GOV; 7GOW; 7GOX; 7GOY; 7GOZ; 7GP0; 7GP1; 7GP2; 7GP3; 7GP4; 7GP5; 7GP6; 7GP7; 7GP8; 7GP9; 7GPA; 7GPC; 7GPD; 7GPE; 7GPF; 7GPG; 7GPH; 7GPI; 7GPJ; 7GPK; 7GPL; 7GPM; 7GPN; 7GPO; 7GPP; 7GPQ; 7GPR; 7GPS; 7GPT; 7GPU; 7GPV; 7GPW; 7GPX; 7GPY; 7GPZ; 7GQ0; 7GQ1; 7GQ2; 7GQ3; 7GQ4; 7GQ5; 7GQ6; 7GQ7; 7GQ8; 7GQ9; 7GQA; 7GQB; 7GQC; 7GQD; 7GQE; 7GQF; 7GQG; 7GQH; 7GQI; 7GQJ; 7GQK; 7GQL; 7GQM; 7GQN; 7GQO; 7GQP; 7GQQ; 7GQR; 7JRE; 8CNX

POLG_HKV1

Human klassevirus 1 (HKV-1)

POLG_HPE1H

Human parechovirus 1 (strain Harris) (HPeV-1) (Echovirus 22)

4UDF; 4Z92; 5MJV; 7ZTW; 7ZU3; 7ZU4

POLG_HPEV5

Human parechovirus 5 (strain CT86-6760) (HPeV-5) (Echovirus 23)

POLG_HRV14

Human rhinovirus 14 (HRV-14)

1D3I; 1HRI; 1HRV; 1K5M; 1NA1; 1NCQ; 1R08; 1R09; 1RMU; 1RUC; 1RUD; 1RUE; 1RUF; 1RUG; 1RUH; 1RUI; 1RUJ; 1RVF; 1VRH; 1XR5; 2B0F; 2HWB; 2HWC; 2IN2; 2R04; 2R06; 2R07; 2RM2; 2RMU; 2RR1; 2RS1; 2RS3; 2RS5; 4PDW; 4RHV; 5W3E; 5W3L; 5W3M; 5W3O; 6HLT; 6KYZ; 6KZ0

POLG_HRV15

Human rhinovirus C (strain C15) (HRV-C15)

5JZG; 5K0U; 5X45; 6KU7; 6KU8; 6PPO; 6PSF

POLG_HRV16

Human rhinovirus 16 (HRV-16)

1AYM; 1AYN; 1C8M; 1D3E; 1NCR; 1ND2; 1ND3; 1QJU; 1QJX; 1QJY; 1TP7; 1XR7; 4K50

POLG_HRV1A

Human rhinovirus 1A (HRV-1A)

1AYM; 1AYN; 1R1A; 2HWD; 2HWE; 2HWF

POLG_HRV1B

Human rhinovirus 1B (HRV-1B)

POLG_HRV2

Human rhinovirus 2 (HRV-2)

1A3R; 1CQQ; 1FPN; 1V9U; 2HRV; 2XYA; 3DPR; 3TN9; 3VDD; 4L3B; 5FX5; 5FX6; 6FFN; 6FFS; 7ARA

POLG_HRV3

Human rhinovirus 3 (HRV-3)

POLG_PEV9U

Porcine enterovirus 9 (strain UKG/410/73)

POLG_POL1S

Poliovirus type 1 (strain Sabin)

POLG_POL2L

Poliovirus type 2 (strain Lansing)

POLG_POL2W

Poliovirus type 2 (strain W-2)

POLG_POL32

Poliovirus type 3 (strain 23127)

POLG_POL3L

Poliovirus type 3 (strains P3/Leon/37 and P3/Leon 12A[1]B)

1PIV; 1PVC; 1VBA; 1VBB; 1VBC; 1VBE; 3EPD; 3IYB; 3IYC; 5O5B; 5O5P; 8E8R; 8E8X

POLG_SAFV

Saffold virus (SafV) (Human TMEV-like virus-Saffold)

5A8F; 5CFC; 5CFD

POLG_SVDVH

Swine vesicular disease virus (strain H/3 '76) (SVDV)

POLG_SVDVU

Swine vesicular disease virus (strain UKG/27/72) (SVDV)

POLG_TMEVB

Theiler's murine encephalomyelitis virus (strain BeAn 8386) (TMEV)

POLG_TMEVD

Theiler's murine encephalomyelitis virus (strain DA) (TMEV)

POLG_TMEVG

Theiler's murine encephalomyelitis virus (strain GDVII) (TMEV)

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