Arenaviridae (taxid:11617)

VIRION

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Enveloped, spherical. Diameter from 60 to 300 nm.

GENOME

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Segmented Negative-stranded RNA linear genome, L segment is about 7,5 kb and S segment 3,5 kb.
Encodes for four proteins.

GENE EXPRESSION

Both segments are ambisens. The viral RNA dependent RNA polymerase (L) binds to a promoter on each encapsidated segment, and transcribes a messager RNA. Transcription is terminated by a strong hairpin sequence at the end of each gene. mRNAs are capped, probably by L protein during synthesis.

ENZYMES

REPLICATION

CYTOPLASM

  1. Virus attaches to host receptors though GP glycoprotein and is endocytosed into vesicles in the host cell by apoptotic mimicry.
  2. Fusion of virus membrane with the vesicle membrane; ribonucleocapsid is released in the cytoplasm.
  3. Sequential transcription, viral mRNAs are capped in the cytoplasm.
  4. Replication presumably starts when enough nucleoprotein is present to encapsidate neo-synthetized antigenomes and genomes.
  5. The ribonucleocapsid interacts with the Z protein under the plasma membrane and buds, releasing the virion.

Host-virus interaction

Inhibition of host Interferon induction

The Z protein plays a role in inhibition of antiviral signaling through RIG-I

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

92 entries grouped by strain

4 entries

Alethinophid 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009) (Golden Gate virus) reference strain

Select_allDeselect_all
L_GOGV RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
NCAP_GOGV Nucleoprotein (Nucleocapsid protein) (Protein N)
GLYC_GOGV Glycoprotein
MEM_GOGV Putative membrane protein

4 entries

Cupixi mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970) (CPXV) reference strain

Select_allDeselect_all
GLYC_CPXVB Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_CPXVB RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_CPXVB RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_CPXVB Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Lassa virus (strain Mouse/Sierra Leone/Josiah/1976) (LASV) reference strain

Select_allDeselect_all
Z_LASSJ RING finger protein Z (Protein Z) (Zinc-binding protein)
GLYC_LASSJ Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_LASSJ Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
L_LASSJ RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...

4 entries

Latino mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965) (LATV) reference strain

Select_allDeselect_all
GLYC_LATVB Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_LATVB RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
NCAP_LATVB Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
Z_LATVB RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Lymphocytic choriomeningitis virus (strain Armstrong) (LCMV) reference strain

Select_allDeselect_all
GLYC_LYCVA Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_LYCVA Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
L_LYCVA RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_LYCVA RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Oliveros mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990) (OLVV) reference strain

Select_allDeselect_all
GLYC_OLVVA Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_OLVVA RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_OLVVA RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_OLVVA Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Pirital mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) (PIRV) reference strain

Select_allDeselect_all
GLYC_PIRVV Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_PIRVV RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_PIRVV RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_PIRVV Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Tacaribe virus (strain Franze-Fernandez) (TCRV) reference strain

Select_allDeselect_all
GLYC_TACVF Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_TACVF Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
L_TACVF RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_TACVF RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Whitewater Arroyo mammarenavirus (isolate Rat/United States/AV 9310135/1995) (WWAV) reference strain

Select_allDeselect_all
GLYC_WWAVU Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_WWAVU RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
NCAP_WWAVU Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
Z_WWAVU RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Allpahuayo mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)

Select_allDeselect_all
GLYC_ALLVP Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_ALLVP RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_ALLVP RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_ALLVP Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Bear Canyon mammarenavirus (isolate Mouse/United States/AV A0070039/2000) (BCNV)

Select_allDeselect_all
GLYC_BCNVU Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_BCNVU RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_BCNVU RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_BCNVU Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Chapare mammarenavirus (isolate Human/Bolivia/810419/2003)

Select_allDeselect_all
GLYC_CHAVB Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_CHAVB RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
NCAP_CHAVB Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
Z_CHAVB RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Guanarito mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Select_allDeselect_all
GLYC_GTOVV Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_GTOVV RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_GTOVV RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_GTOVV Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Ippy mammarenavirus (isolate Rat/Central African Republic/Dak An B 188 d/1970) (IPPYV)

Select_allDeselect_all
GLYC_IPPYV Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_IPPYV RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_IPPYV RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_IPPYV Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Select_allDeselect_all
GLYC_JUNIN Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_JUNIN Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
L_JUNIN RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_JUNIN RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Machupo virus (MACV)

Select_allDeselect_all
GLYC_MACHU Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_MACHU RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
NCAP_MACHU Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)
Z_MACHU RING finger protein Z (Protein Z) (Zinc-binding protein)

4 entries

Mobala mammarenavirus (isolate Rat/Central African Republic/Acar 3080/1983) (MOBV)

Select_allDeselect_all
GLYC_MOBVC Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_MOBVC RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_MOBVC RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_MOBVC Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Parana mammarenavirus (isolate Rat/Paraguay/12056/1965) (PARV) (Paran mammarenavirus)

Select_allDeselect_all
GLYC_PARVP Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_PARVP RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_PARVP RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_PARVP Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Sabia mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV) (Sabi mammarenavirus)

Select_allDeselect_all
GLYC_SABVB Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_SABVB RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_SABVB RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_SABVB Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

4 entries

Tamiami mammarenavirus (isolate Rat/United States/W 10777/1964) (TAMV)

Select_allDeselect_all
GLYC_TAMVU Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
L_TAMVU RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...
Z_TAMVU RING finger protein Z (Protein Z) (Zinc-binding protein)
NCAP_TAMVU Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

2 entries

Lassa virus (strain GA391) (LASV)

Select_allDeselect_all
GLYC_LASSG Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_LASSG Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

2 entries

Lymphocytic choriomeningitis virus (strain WE) (LCMV)

Select_allDeselect_all
GLYC_LYCVW Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_LYCVW Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

2 entries

Mopeia virus (MOPV)

Select_allDeselect_all
GLYC_MOPEI Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_MOPEI Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

2 entries

Pichinde mammarenavirus (PICV) (Pichind mammarenavirus)

Select_allDeselect_all
GLYC_PIARV Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
NCAP_PIARV Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

1 entry

Mammarenavirus lassaense

L_LASV RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) ...

1 entry

Tacaribe virus (strain TRVL 11598) (TCRV)

GLYC_TACVT Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...

1 entry

Tacaribe virus (strain V5) (TCRV)

GLYC_TACV5 Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...

1 entry

Tacaribe virus (strain V7) (TCRV)

GLYC_TACV7 Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); ...
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Alethinophid 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009) taxid:1223562

Protein ModelArchive
Glycoprotein ma-jd-viral-51469
Nucleoprotein (Nucleocapsid protein) (Protein N) ma-jd-viral-04945
Putative membrane protein ma-jd-viral-62943

Allpahuayo mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) taxid:144752

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04957
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51274

Bear Canyon mammarenavirus (isolate Mouse/United States/AV A0070039/2000) taxid:3052298

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04946
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51273
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04517

CAS virus taxid:1223561

Protein ModelArchive
Glycoprotein ma-jd-viral-51468
Nucleoprotein ma-jd-viral-04963
Z protein ma-jd-viral-62945

Chapare mammarenavirus (isolate Human/Bolivia/810419/2003) taxid:3052302

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04961
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51280
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04501

Lunk virus NKS-1 taxid:1134579

Protein ModelArchive
Glycoprotein ma-jd-viral-51287
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04941
Z protein ma-jd-viral-04503

Lymphocytic choriomeningitis virus (strain Armstrong) taxid:11624

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04958
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51292
Uncharacterized protein ma-jd-viral-64853

Machupo virus taxid:3052317

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04955
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51294
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04518

Mammarenavirus choriomeningitidis taxid:3052303

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04958

Mammarenavirus gairoense taxid:3052306

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04948
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51288
Z protein ma-jd-viral-04513

Mammarenavirus lujoense taxid:3052314

Protein ModelArchive
Glycoprotein ma-jd-viral-51291
Multifunctional matrix-like protein (Z protein) ma-jd-viral-04509
Nucleocapsid protein (Nucleoprotein) ma-jd-viral-04960

Mammarenavirus lunaense taxid:3052315

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04947
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51285
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04511

Mammarenavirus marientalense taxid:3052318

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04952
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51281
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04506

Mammarenavirus merinoense taxid:3052319

Protein ModelArchive
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-04939
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51282
Z protein ma-jd-viral-04507

Mammarenavirus okahandjaense taxid:3052321

Protein ModelArchive
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-04954
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51277
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04505

Mammarenavirus wenzhouense taxid:3052330

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04940
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51276
Z protein ma-jd-viral-04514

Mopeia Lassa virus reassortant 29 taxid:300180

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04938
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51284
Z protein ma-jd-viral-04502

Morogoro mammarenavirus taxid:573900

Protein ModelArchive
Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N) ma-jd-viral-04962
Pre-glycoprotein polyprotein GP complex (Pre-GP-C) ma-jd-viral-51278
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04508

Pichinde mammarenavirus taxid:3052300

Protein ModelArchive
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04522

Pirital mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) taxid:3052324

Protein ModelArchive
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04521

ROUT virus taxid:1303019

Protein ModelArchive
Glycoprotein ma-jd-viral-51470
Nucleocapsid protein ma-jd-viral-04956
Z protein ma-jd-viral-62947

Tamiami mammarenavirus (isolate Rat/United States/W 10777/1964) taxid:3052329

Protein ModelArchive
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04520

University of Helsinki virus taxid:1382279

Protein ModelArchive
Glycoprotein ma-jd-viral-51471
Nucleoprotein ma-jd-viral-04942
Z protein ma-jd-viral-62944

Whitewater Arroyo mammarenavirus (isolate Rat/United States/AV 9310135/1995) taxid:3052331

Protein ModelArchive
RING finger protein Z (Protein Z) (Zinc-binding protein) ma-jd-viral-04516