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Phenuiviridae (taxid:1980418)

VIRION

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Enveloped, spherical. Diameter from 80 to 120nm. Glycoproteins at the surface of the envelope are arranged on an icosahedral lattice, with T=12 symmetry.

GENOME

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Segmented Negative-stranded RNA linear genome, L segment is about 6.4kb, M segment about 3.2kb and S segment about 1.7kb.
Encodes for six proteins.

GENE EXPRESSION

Transcription starts by viral RNA dependent RNA polymerase (L) binding to a promoter on each encapsidated segment, and is terminated by a strong hairpin sequence at the end of each gene. These are capped by L protein during synthesis using cap snatching , but are not polyadenylated.
S segment uses ambisense strategy to encode for several proteins: both genomic and antigenomic RNA are transcribed. The hairpin sequence is a stop polymerase signal which prevents ambisense transcription from producing dsRNA.

ENZYMES

REPLICATION

CYTOPLASMIC

  1. Virus attaches to host receptors though Gn-Gc glycoprotein dimer, and is endocytosed into vesicles in the host cell.
  2. Fusion of virus membrane with the vesicle membrane; ribonucleocapsid segments are released in the cytoplasm.
  3. Transcription, viral mRNAs are capped in the cytoplasm.
  4. Replication presumably starts when enough nucleoprotein is present to encapsidate neo-synthetized antigenomes and genomes.
  5. The ribonucleocapsids buds at Golgi apparatus, releasing the virion by exocytosis.

Host-virus interaction

Inhibition of host transcription initiation

The Rift valley fever virus NSs protein instead plays a role in the inhibition of the host transcription initiation by acting on host TFIIH.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

0 entry grouped by strain

These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Adana virus taxid:1611877

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-61252
Nonstructural protein ma-jd-viral-25090
Nucleoprotein ma-jd-viral-17413

Aguacate virus taxid:1006583

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-61239
Nonstructural protein ma-jd-viral-25114
Nucleoprotein ma-jd-viral-17406

Bhanja virus taxid:1213620

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-66157
Nonstructural protein ma-jd-viral-25080
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17416

Chandiru virus taxid:629725

Protein ModelArchive
Nonstructural protein ma-jd-viral-25084
Nucleoprotein ma-jd-viral-17405

Heartland virus taxid:1216928

Protein ModelArchive
Non-structural protein NS-S (NSs) ma-jd-viral-25076
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17444

Huangpi Tick Virus 2 taxid:1608048

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-66159
Nonstructural protein ma-jd-viral-25063
Nucleoprotein ma-jd-viral-17382

Hubei diptera virus 3 taxid:1922884

Protein ModelArchive
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-65458
Putative glycoprotein ma-jd-viral-66146

Hubei diptera virus 4 taxid:1922885

Protein ModelArchive
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17459
Putative glycoprotein ma-jd-viral-66153

Hubei diptera virus 5 taxid:1922886

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-63990
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17463

Hubei lepidoptera virus 1 taxid:1922903

Protein ModelArchive
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17380
Putative glycoprotein ma-jd-viral-48436

Hunter Island virus taxid:1457386

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-66150
Nonstructural protein (Nucleoprotein) ma-jd-viral-25078
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17443

Lone Star virus taxid:1219465

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-66163
Nonstructural S protein ma-jd-viral-25081
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17396

Rift valley fever virus taxid:11588

Protein ModelArchive
Nucleoprotein ma-jd-viral-17430
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17430
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17430
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17430
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17430

Rift valley fever virus (strain ZH-548 M12) taxid:11589

Protein ModelArchive
Non-structural protein NS-S ma-jd-viral-25083
Non-structural protein S (NSs) ma-jd-viral-25083
Nucleoprotein ma-jd-viral-17430

SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010) taxid:992212

Protein ModelArchive
Non-structural protein NS-S (NSs) ma-jd-viral-25077
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17414
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17414
Nucleoprotein (Nucleocapsid protein) (Protein N) ma-jd-viral-17414

Sandfly fever Naples virus taxid:206160

Protein ModelArchive
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17426

Tenuivirus oryzabrevis taxid:3052762

Protein ModelArchive
20.6K nonstructural protein (Disease-specific protein) (Noncapsid protein) (p6v... ma-jd-viral-33897
21.6K protein (NS5) ma-jd-viral-60236
36.4K protein ma-jd-viral-27849
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17454

Wenzhou Shrimp Virus 1 taxid:1608095

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-66156
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17391

Wuhan Fly Virus 1 taxid:1608101

Protein ModelArchive
Glycoprotein ma-jd-viral-63993
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17458

Wuhan horsefly Virus taxid:1608139

Protein ModelArchive
Glycoprotein ma-jd-viral-53013
Nonstructural protein ma-jd-viral-38613
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17456

Yichang Insect virus taxid:1608144

Protein ModelArchive
Envelopment polyprotein (M polyprotein) ma-jd-viral-66152
Nucleoprotein (Nucleocapsid protein) ma-jd-viral-17411

sandfly fever Turkey virus taxid:688699

Protein ModelArchive
Non-structural protein NS-S ma-jd-viral-25101
Nucleoprotein ma-jd-viral-17420