Fromanvirus (taxid:186764)
VIRION
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Non-enveloped, head-tail structure. The capsid is icosahedral, about 60nm in diameter. The capsid proteins are covalently linked. Tail is flexible, about 135 nm in length and 8 nm in width, with a terminal knob and a single short fiber.
GENOME
Linear, dsDNA genome of about 52 kb, containing about 88 genes. The genome has cohesive ends (cos sites).
GENE EXPRESSION
REPLICATION
CYTOPLASMIC
- Adsorption: The phage attaches to target cell adhesion receptors through its tail fibers.
- Ejection of the viral DNA into host cell cytoplasm by long flexible tail ejection system.
- Transcription and translation of early genes.
- Shutoff of host gene expression, possibly by gp77, gp78 and gp79.
- Replication of genomic DNA by rolling circle.
- Transcription and translation of late genes
- Assembly of an empty procapsid and packaging of the genome.
- Viral tail fiber assembly and viral tail assembly.
- Mature virions are released from the cell by lysis.
Matching UniProtKB/Swiss-Prot entries
(all links/actions below point to uniprot.org website)152 entries grouped by protein
2 entries
Probable major capsid protein gp17 (Gene product 17) (gp17) (Major head protein gp17)
1 entry
Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)
2 entries
DNA polymerase (EC 2.7.7.7) (EC 3.1.11.-)
2 entries
Endolysin A (EC 3.-.-.-) (Gene 10 protein) (Gp10) (Lysis protein) (Lysozyme)
1 entry
Gene product 34 (Gp34)
2 entries
Holin (Gene product 11) (gp11)
2 entries
Endolysin B (Gene 12 protein) (Gp12) (Mycolylarabinogalactan esterase) (EC 3.1.-.-)
2 entries
Portal protein (Gene product 14) (gp14) (Portal vertex protein)
1 entry
Putative non-heme haloperoxidase (EC 1.11.1.-)
2 entries
Probable capsid assembly scaffolding protein (Gene product 16) (gp16) (Head morphogenesis protein) (Scaffold protein)
2 entries
Tail assembly protein Gp25 (Gene 25 protein) (Gp25)
2 entries
Probable flavin-dependent thymidylate synthase (FDTS) (EC 2.1.1.148) (FAD-dependent thymidylate synthase) (Gp48)
2 entries
Gene 1 protein (Gp1)
2 entries
Gene 2 protein (Gp2)
2 entries
Gene 3 protein (Gp3)
2 entries
Gene 4 protein (Gp4)
2 entries
Gene 5 protein (Gp5)
2 entries
Minor tail protein Gp6
2 entries
Gene 13 protein (Gp13)
2 entries
Gene 15 protein (Gp15)
2 entries
Gene 18 protein (Gp18)
2 entries
Gene 19 protein (Gp19)
2 entries
Gene 20 protein (Gp20)
2 entries
Gene 21 protein (Gp21)
2 entries
Gene 22 protein (Gp22)
2 entries
Major tail protein Gp23 (Major coat protein)
2 entries
Tail assembly protein Gp24 (Gene product 24) (Gp24) (Minor tail protein Gp24)
2 entries
Minor tail protein Gp26
2 entries
Minor tail protein Gp27
2 entries
Minor tail protein Gp28
2 entries
Gene 29 protein (Gp29)
2 entries
Gene 30 protein (Gp30)
2 entries
Gene 31 protein (Gp31)
2 entries
Gene 32 protein (Gp32)
1 entry
Gene 34.1 protein (Gp34.1)
1 entry
Gene 35 protein (Gp35)
1 entry
Gene 37 protein (Gp37)
2 entries
Gene 38 protein (Gp38)
2 entries
Gene 39 protein (Gp39)
1 entry
Gene 40 protein (Gp40)
2 entries
Gene 41 protein (Gp41)
2 entries
Gene 42 protein (Gp42)
1 entry
Gene 43 protein (Gp43)
1 entry
Gene 44.1 protein (Gp44.1)
1 entry
Gene 45 protein (Gp45)
2 entries
Gene 46 protein (Gp46)
1 entry
Gene 47 protein (Gp47)
2 entries
Gene 49 protein (Gp49)
2 entries
Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase (EC 1.17.4.2) (Gp50)
2 entries
Gene 51 protein (Gp51)
2 entries
Gene 52 protein (Gp52)
2 entries
Gene 53 protein (Gp53)
2 entries
Gene 54 protein (Gp54)
2 entries
Gene 55 protein (Gp55)
2 entries
Gene 56 protein (Gp56)
2 entries
Gene 57 protein (Gp57)
2 entries
Gene 58 protein (Gp58)
2 entries
Gene 59 protein (Gp59)
1 entry
Gene 60 protein (Gp60)
2 entries
Gene 61 protein (Gp61)
2 entries
Gene 62 protein (Gp62)
2 entries
Gene 63 protein (Gp63)
2 entries
Gene 64 protein (Gp64)
2 entries
Gene 65 protein (Gp65)
2 entries
Gene 66 protein (Gp66)
1 entry
Gene 67 protein (Gp67)
2 entries
Gene 68 protein (Gp68)
2 entries
Gene 69 protein (Gp69)
2 entries
Gene 70 protein (Gp70)
1 entry
Repressor-like immunity protein (Gp71)
1 entry
Gene 72 protein (Gp72)
1 entry
Gene 73 protein (Gp73)
1 entry
Gene 74 protein (Gp74)
1 entry
Gene 75 protein (Gp75)
1 entry
Gene 76 protein (Gp76)
1 entry
Gene 77 protein (Gp77)
1 entry
Gene 78 protein (Gp78)
1 entry
Gene 79 protein (Gp79)
1 entry
Gene 80 protein (Gp80)
1 entry
Gene 81 protein (Gp81)
1 entry
Gene 82 protein (Gp82)
1 entry
Gene 83 protein (Gp83)
2 entries
Gene 84 protein (Gp84)
1 entry
Gene 85 protein (Gp85)
2 entries
Gene 86 protein (Gp86)
2 entries
Gene 87 protein (Gp87)
2 entries
Gene 88 protein (Gp88)
1 entry
Gene 89 protein (Gp89)
2 entries
Integrase (EC 2.7.7.-) (EC 3.1.-.-)
2 entries