Skip to main content
ViralZone logo emblem ViralZone

Suppressor of RNA silencing (kw:KW-0941)

RNA-mediated gene silencing (also known as RNA interference, RNAi) is a conserved sequence-specific gene regulation system, which has an essential role in the maintenance of cell genome integrity, and, in higher plants and insects, it also operates as an adaptive inducible antiviral defense mechanism. It consists in sequence-specific recognition and inhibition of target genes expression by endogenous (gene, development, stress response regulation) or virus-derived short silencing RNAs (sRNAs) .

Target genes expression can be inhibited post-translationally (post-transcriptional gene silencing or PTGS): target dsRNAs are recognized by Dicer-like enzymes (DCL) and diced into small interfering RNAs duplexes (siRNA) of about 21- to 24-nt, which interact with Argonaute (AGO) proteins and associated proteins to form RNA-induced complexes (RISCs) to target homologous RNAs for destruction. PTGS can also be performed by endogenous microRNAs (miRNAs). miRNAs differ from siRNAs in that they are encoded by cellular genes and generally base pair imperfectly with homologous RNAs to target them for destruction or inhibit their translation.

Target genes expression can also be inhibited by heavy methylation of concerned DNA loci (transcriptional gene silencing or TGS).

image

To counteract host RNAi antiviral defense, viruses from almost all plant virus genera (and also from some animal viruses) encode viral suppressors of RNA silencing (VSRs) which inhibit key steps of cellular RNAi system . They are often multifunctional and play important roles in viral replication, coating, movement, and pathogenesis, in addition to suppressing host RNA silencing-based antiviral immunity.


VSRs suppress RNA silencing pathways mainly:

-through dsRNA binding. Sequestering siRNA duplexes prevents small RNA loading into the AGO effector proteins to assemble the RNA-induced silencing complex (RISC). Sequestering long dsRNA duplexes inhibits siRNA biogenesis.

-by interacting with and inhibiting components of the host RISC machinery.

-by inhibiting enzymes necessary for host cell-mediated DNA methylation.

Viral molecular biology Virion
Virus entry
Virus latency
Transcription and replication
Host-virus interactions
Virus exit
Links Uniprot Keyword: KW-0941
GO ontology:
Family/Genus Virus Viral proteins Reference Mechanism of action
Alphaflexiviridae, Potexvirus Triple gene block protein 1 -
Betaflexiviridae, Carlavirus Potato virus M Triple gene block protein 1, ORF6 Sequesters siRNA duplexes (ORF6)
Betaflexiviridae, Citrivirus Citrus leaf blotch virus Movement protein
Betaflexiviridae, Trichovirus Apple chlorotic leaf spot virus 50 kDa movement protein
Betaflexiviridae, Vitivirus Grapevine virus A ORF5 p10 Sequesters siRNA duplexes
Bromoviridae, Cucumovirus Cucumber mosaic virus Protein 2b sequestering siRNA and long dsRNA
Tomato aspermy virus Protein 2b Sequesters siRNA duplexes
Bromoviridae, Ilarvirus Tobacco streak virus Protein 2b - -
Bunyaviridae, Tospovirus Tomato spotted wilt virus NSs Sequesters both long dsRNA and double-stranded siRNA or miRNA
Closteroviridae, Closterovirus Beet yellows virus P21 Sequesters siRNA duplexes
Citrus tristeza virus p23, capsid protein, p20 -
Closteroviridae, Crinivirus Sweet potato chlorotic stunt virus P22 Sequesters siRNA duplexes
Tomato chlorosis virus P22 Sequesters siRNA duplexes
Dicistroviridae, Cripavirus Drosophila C virus DCV-1A Sequesters long dsRNA and inhibits siRNA biogenesis
Cricket paralysis virus CrPV-1A Interaction with Argonaute 2 and inhibition of RISC
Geminiviridae, Begomovirus Mungbean yellow mosaic virus-Vigna TrAP/AC2 -
Tomato leaf curl Java virus V2 -
Tomato leaf curl China virus V2 ?Sequesters siRNA duplexes
Tomato yellow leaf curl virus C4 -
Luteoviridae , Polerovirus Beet western yellows virus P0 protein Targets AGO1 to degradation
Luteoviridae, Enamovirus Pea enation mosaic virus-1 P0 protein Targets AGO1 to degradation
Nanoviridae , Babuvirus Banana bunchy top virus Clink , MP -
Nodaviridae, Alphanodavirus Flock house virus B2 protein Interaction with Dicer leads to suppression of siRNA biogenesis
Nodaviridae, Alphanodavirus Flock house virus B2 protein Interaction with Dicer leads to suppression of siRNA biogenesis
Nodamura virus B2 protein Interaction with Dicer leads to suppression of siRNA biogenesis
Potyviridae, Potyvirus HC-Pro Prevents accumulation of siRNA
Potyviridae, Ipomovirus Cucumber vein yellowing virus P1b protein Sequesters siRNA duplexes
Potyviridae, Poacevirus Triticum mosaic virus P1 protein -
Potyviridae, Tritimovirus Wheat streak mosaic virus P1 protein -
Reoviridae, Phytoreovirus Rice gall dwarf virus Pns11, Pns12 -
Rice dwarf virus Pns10 -
Reoviridae, Oryzavirus Rice ragged stunt virus Pns6 -
Rice dwarf virus Pns10 -
Secoviridae, Comovirus Cowpea mosaic virus small capsid protein -
Tenuivirus Rice stripe virus NS3 Sequesters siRNA duplexes
Sobemovirus Cocksfoot mottle virus P1
Rice yellow mottle virus P1
Tombusviridae, Tombusvirus Carnation Italian ringspot virus p19 Sequesters siRNA duplexes
Tombusviridae, Aureusvirus Pothos latent virus Protein p14 Sequesters both long dsRNA and double-stranded siRNA
Tombusviridae, Dianthovirus Red clover necrotic mosaic virus MP -
Tombusviridae, Carmovirus Turnip crinkle virus Capsid protein P38 Competes for and inhibits Argonaute 1
Tymoviridae, Tymovirus Turnip yellow mosaic virus p69 -
Virgaviridae, Furovirus Soil-borne wheat mosaic virus P19 -
Virgaviridae, Pecluvirus Peanut clump virus P15 -
Virgaviridae, Hordeivirus Barley stripe mosaic virus Gamma-B -
Virgaviridae, tobamovirus Tobacco mosaic virus Small replicase subunit -
Virgaviridae, Tobravirus Tobacco rattle virus P16 -
Hypovirus Cryphonectria hypovirus 1 P29 -

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

298 entries grouped by strain

3 entries

African cassava mosaic virus (isolate Nigerian) (ACMV) (Cassava latent virus (isolate Nigerian)) reference strain

Select_allDeselect_all
TRAP_CLVN Transcriptional activator protein (TrAP) (15.2 kDa protein) (Protein AC2) (Protein AL2)
AC4_CLVN Protein AC4 (Protein AL4)
AV2_CLVN Uncharacterized 13.1 kDa protein

3 entries

Mungbean yellow mosaic virus (strain Vigna) (MYMV) reference strain

Select_allDeselect_all
TRAP_MYMVV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_MYMVV Protein AC4 (Protein AL4)
AV2_MYMVV Protein AV2

3 entries

Tomato leaf curl virus (strain Australia) (ToLCV) reference strain

Select_allDeselect_all
TRAP_TLCVA Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AV2_TLCVA Protein V2
AC4_TLCVA Protein C4 (10.9 kDa protein) (Protein L4)

3 entries

Tomato yellow leaf curl China virus (TYLCCNV) reference strain

Select_allDeselect_all
TRAP_TYLCC Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AC4_TYLCC Protein C4 (10.9 kDa protein) (Protein L4)
AV2_TYLCC Protein V2

3 entries

Tomato yellow leaf curl Sardinia virus (TYLCSV) reference strain

Select_allDeselect_all
TRAP_TYCSV Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AC4_TYCSV Protein C4 (11.1 kDa protein) (Protein L4)
AV2_TYCSV Protein V2

3 entries

Tomato yellow leaf curl virus (strain Israel) (TYLCV) reference strain

Select_allDeselect_all
TRAP_TYLCI Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AV2_TYLCI Protein V2
AC4_TYLCI Protein C4 (10.9 kDa protein) (Protein L4)

3 entries

Zaire ebolavirus (strain Mayinga-76) (ZEBOV) (Zaire Ebola virus) reference strain

Select_allDeselect_all
VP35_EBOZM Polymerase cofactor VP35 (Ebola VP35) (eVP35)

pdb 3FKE; 3L25; 3L26; 3L27; 3L28; 3L29; 4IBB; 4IBC; 4IBD; 4IBE; 4IBF; 4IBG; 4IBI; 4IBJ; 4IBK; 4IJE; 4IJF; 4YPI; 4ZTA; 4ZTG; 4ZTI; 6GBO; 6GBP; 8USN; 8UST

VP40_EBOZM Matrix protein VP40 (Ebola VP40) (eVP40) (Membrane-associated protein VP40)

pdb 1H2C; 1H2D; 2KQ0; 4EJE; 4LDB; 4LDD; 4LDI; 4LDM; 7JZJ; 7JZT; 7K5D; 7K5L

VP30_EBOZM Transcriptional activator VP30 (Ebola VP30) (eVP30) (Minor nucleoprotein VP30)

pdb 5DVW; 5T3T

2 entries

Abutilon mosaic virus (isolate West India) (AbMV) reference strain

Select_allDeselect_all
TRAP_ABMVW Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_ABMVW Protein AC4 (Protein AL4)

2 entries

Banana bunchy top virus (isolate Autralia) (BBTV) reference strain

Select_allDeselect_all
MVP_BBTVA Movement and RNA silencing protein (MP)
CLINK_BBTVA Cell cycle link protein (Clink)

2 entries

Bean golden yellow mosaic virus (isolate Puerto Rico) (BGYMV) (Bean golden mosaic virus (isolate Puerto Rico)) reference strain

Select_allDeselect_all
TRAP_BGYMV Transcriptional activator protein (TrAP) (19.6 kDa protein) (Protein AC2) (Protein AL2)
AC4_BGYMV Protein AC4 (Protein AL4)

2 entries

Bean golden yellow mosaic virus (isolate Puerto Rico-Japan) (BGYMV) reference strain

Select_allDeselect_all
TRAP_BGYMJ Transcriptional activator protein (TrAP) (19.6 kDa protein) (Protein AC2) (Protein AL2)
AC4_BGYMJ Protein AC4 (Protein AL4)

2 entries

Beet curly top virus (strain California/Logan) (BCTV) reference strain

Select_allDeselect_all
AC4_BCTVC Protein C4 (Protein L4)
C2_BCTVC Protein C2 (Protein L2)

2 entries

Pepper huasteco yellow vein virus (PHYVV) (Pepper huasteco virus) reference strain

Select_allDeselect_all
TRAP_PHUV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_PHUV Protein AC4 (Protein AL4)

2 entries

Potato virus M (strain Russian) (PVM) reference strain

Select_allDeselect_all
TGB1_PVMR Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...
VSR_PVMR RNA silencing suppressor (10.7 kDa protein) (Putative nucleic acid-binding protein)

2 entries

Potato virus Y (strain N) (PVY) reference strain

Select_allDeselect_all
POLG_PVYN Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

pdb 6NFW

MVP_PVYN P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Potato yellow mosaic virus (isolate Venezuela) (PYMV) reference strain

Select_allDeselect_all
TRAP_PYMVV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_PYMVV Protein AC4 (Protein AL4)

2 entries

Red clover necrotic mosaic virus (RCNMV) reference strain

Select_allDeselect_all
RDRP_RCNMV RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)
MP_RCNMV Movement protein (MP)

2 entries

Soybean mosaic virus (strain N) (SMV) reference strain

Select_allDeselect_all
POLG_SBMVN Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_SBMVN P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Squash leaf curl virus (SLCV) reference strain

Select_allDeselect_all
TRAP_SLCV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_SLCV Protein AC4 (Protein AL4)

2 entries

Tomato pseudo-curly top virus (TPCTV) reference strain

Select_allDeselect_all
C2_TPCTV Protein C2 (Protein L2)
AC4_TPCTV Protein C4 (Protein L4)

2 entries

Turnip mosaic virus (strain Japanese) (TuMV) reference strain

Select_allDeselect_all
MVP_TUMVJ P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...
POLG_TUMVJ Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

pdb 3RNV

1 entry

Apple chlorotic leaf spot virus (isolate plum P863) (ACLSV) reference strain

MP_ACLSP Putative movement protein (50.8 kDa protein) (ORF2 protein)

1 entry

Apple stem pitting virus (isolate PA66) (ASPV) reference strain

TGB1_ASPVP Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Autographa californica nuclear polyhedrosis virus (AcMNPV) reference strain

P35_NPVAC Early 35 kDa protein (Apoptosis-preventing protein) (p35)

pdb 1I3P; 1I3S; 1I4E; 1P35; 2FUN

1 entry

Barley stripe mosaic virus (BSMV) reference strain

VSR_BSMV Suppressor of RNA silencing (Gamma-B protein) (Gammab protein)

1 entry

Barley yellow dwarf virus (isolate PAV) (BYDV) reference strain

MVP_BYDVP Movement protein (MP) (17 kDa protein)

1 entry

Beet necrotic yellow vein virus (isolate Japan/S) (BNYVV) reference strain

VSR_BNYVS Probable suppressor of RNA silencing (14kD cysteine rich protein) (P14)

1 entry

Beet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

P21_BYVU RNA silencing suppressor (21 kDa protein) (p21)

pdb 2CWO

1 entry

Blackberry virus Y (isolate Blackberry plant/USA:Arkansas/C3ARK/2005) (BVY) reference strain

POLG_BVY3 Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

1 entry

Brome streak virus (strain 11-Cal) (BStV) (Brome streak mosaic rymovirus) reference strain

POLG_BSTV1 Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

1 entry

Carnation ringspot virus (isolate Lommel) (CRSV) reference strain

MP_CRSVL Movement protein (MP)

1 entry

Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984) (CLBV) reference strain

MOVP_CLBVS Putative movement protein (MP) (Cell-to-cell transport protein)

1 entry

Cocksfoot mottle virus (isolate Dactylis glomerata/Norway/CfMV-NO/1995) (CfMV) reference strain

MVP_CFMVN Movement protein P1 (Cell-to-cell transport protein)

1 entry

Cowpea mosaic virus (strain SB) (CPMV) reference strain

POL2_CPMVS RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

pdb 1NY7; 2BFU; 5A32; 5A33; 5FMO

1 entry

Cricket paralysis virus (isolate Teleogryllus commodus/Australia/CrPVVIC/1968) (CrPV) reference strain

POLN_CRPVC Replicase polyprotein [Cleaved into: Protein 1A (CrPV-1A); Protein 2A; Protein 2B; Protein 2C; ...

pdb 6C3R

1 entry

Cryphonectria hypovirus 1 (strain EP713) (CHV-1/EP713) (Chestnut blight fungus hypovirulence-associated virus) reference strain

POLA_CHPVE Polyprotein p69 (ORFA polyprotein) [Cleaved into: Papain-like protease p29 (EC 3.4.22.-); p40 ...

1 entry

Cucumber green mottle mosaic virus (strain watermelon SH) (CGMMV) reference strain

RDRP_CGMVS Replicase large subunit (EC 2.7.7.48) (186 kDa protein) [Cleaved into: Replicase small subunit (EC ...

1 entry

Cucumber mosaic virus (strain FNY) (CMV) reference strain

2B_CMVFN Suppressor of silencing 2b (Protein 2b)

1 entry

Dengue virus type 1 (strain Nauru/West Pac/1974) (DENV-1) reference strain

POLG_DEN1W Genome polyprotein [Cleaved into: Capsid protein C (Capsid protein) (Core protein); Protein prM ...

pdb 3J8D; 3L6P; 3LKW; 4AL8; 4GSX; 4GT0; 4LCY; 4OIG; 5VIC; 5WJL; 5WKF; 7DWT; 7DWU; 8VPR

1 entry

Foxtail mosaic virus reference strain

TGB1_FXMV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Grapevine virus A (isolate Is 151) (GVA) reference strain

VSR_GVAIS RNA silencing suppressor

1 entry

Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996) (ICRSV) reference strain

TGB1_ICRSV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Lolium latent virus (isolate Lolium/USA/US1/-) (LoLV) reference strain

TGB1_LOLV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Narcissus mosaic virus (NMV) reference strain

TGB1_NMV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Nodamura virus (strain Mag115) (NoV) reference strain

B2_NODAM Protein B2

pdb 3G80

1 entry

Papaya mosaic potexvirus (PMV) reference strain

TGB1_PMV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Pea enation mosaic virus-1 (strain WSG) (PEMV-1) reference strain

P0_PEMVW Suppressor of silencing P0 (ORF0 protein)

1 entry

Peanut clump virus (isolate 87/TGTA2) (PCV) reference strain

VSR_PCV87 Suppressor of RNA silencing (15kD cysteine rich protein) (P15)

1 entry

Plantago asiatica mosaic potexvirus (P1AMV) reference strain

TGB1_P1AMV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Poinsettia latent virus (isolate Euphorbia pulcherrima/Germany/Siepen/2005) (PnLV) (Poinsettia cryptic virus) reference strain

VSR_PNLV Putative suppressor of silencing

1 entry

Potato leafroll virus (strain Potato/Scotland/strain 1/1984) (PLrV) reference strain

P0_PLRV1 Suppressor of silencing P0 (28 kDa protein) (Protein ORF0)

1 entry

Potato virus X (strain X3) (PVX) reference strain

TGB1_PVXX3 Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Pothos latent virus (isolate Pigeonpea/India) (PoLV) reference strain

P14_POLVP RNA silencing suppressor p14

1 entry

Rice gall dwarf virus (RGDV) reference strain

VSR_RGDV Suppressor of RNA-mediated gene silencing (Non-structural protein 11) (Pns11)

1 entry

Rice ragged stunt virus (isolate Thailand) (RRSV) reference strain

MVP_RRSVT Movement and RNA silencing protein VP6

1 entry

Rice stripe virus (isolate T) (RSV) reference strain

VSR_RSVT Suppressor of RNA silencing p3 (Protein NS3) (Protein p3)

1 entry

Ryegrass mosaic virus (isolate Denmark/Danish) (RGMV) reference strain

POLG_RGMVD Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

1 entry

Shallot virus X (ShVX) reference strain

TGB1_SHVX Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) (SBWMV) reference strain

VSR_SBWMN Suppressor of RNA silencing (19kD cysteine rich protein) (P19)

1 entry

Southern bean mosaic virus (isolate Bean/United States/Arkansas) (SBMV) reference strain

MVP_SBMVA Movement protein P1 (Cell-to-cell transport protein)

1 entry

Southern cowpea mosaic virus (SCPMV) (Southern bean mosaic virus (strain cowpea)) reference strain

MVP_SCPMV Movement protein P1 (Cell-to-cell transport protein)

1 entry

Strawberry mild yellow edge-associated virus (SMYEaV) reference strain

TGB1_SMYEA Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Sunn-hemp mosaic virus (SHMV) (TMV strain cowpea) reference strain

RDRP_SHMV Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Sweet potato mild mottle virus (isolate Salazar) (SPMMV) reference strain

POLG_SPMMV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

1 entry

Tobacco mosaic virus (strain OM) (TMV) reference strain

RDRP_TMVOM Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tobacco mosaic virus (strain vulgare) (TMV) (Tobacco mosaic virus (strain U1)) reference strain

RDRP_TMV Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tobacco rattle virus (isolate PpK20) (TRV) reference strain

VSR_TRVPP Suppressor of RNA silencing (16kD cysteine rich protein) (P16)

1 entry

Tobacco streak virus (strain WC) (TSV) reference strain

2B_TOBSV Suppressor of silencing 2b (Protein 2b)

1 entry

Tomato aspermy virus (TAV) reference strain

2B_TAV Suppressor of silencing 2b (Protein 2b)

pdb 2ZI0; 3CZ3

1 entry

Tomato bushy stunt virus (strain Cherry) (TBSV) reference strain

P19_TBSVC RNA silencing suppressor p19 (19 kDa symptom severity modulator)

pdb 1R9F

1 entry

Tomato golden mosaic virus (strain Yellow vein) (TGMV) reference strain

TRAP_TGMVY Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)

1 entry

Tomato spotted wilt virus (strain Brazilian Br-01) (TSWV) reference strain

NSS_TSWV1 Non-structural protein NS-S

1 entry

Triticum mosaic virus (isolate Triticum aestivum/United States/U06-123/2006) (TriMV) reference strain

POLG_TRMVU Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein) (EC 3.4.-.-); Helper component ...

1 entry

Turnip crinkle virus (TCV) reference strain

CAPSD_TCV Capsid protein (Coat protein) (p38)

pdb 3ZX8; 3ZX9; 3ZXA

1 entry

Turnip yellow mosaic virus reference strain

P69_TYMV 69 kDa protein (p69)

1 entry

Turnip yellows virus (isolate FL-1) (TuYV) (BWYV-FL1) reference strain

P0_TYYVF Suppressor of silencing P0 (29 kDa protein) (Protein ORF0)

1 entry

White clover mosaic virus (strain M) (WCMV) reference strain

TGB1_WCMVM Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Yellow fever virus (strain 17D vaccine) (YFV) reference strain

POLG_YEFV1 Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 1NA4; 1YKS; 3EVA; 3EVB; 3EVC; 3EVD; 3EVE; 3EVF; 5FFM; 5N6B; 6EPK; 6IW0; 6IW1; 6IW2; 6IW4; 6QSN; 6SS7; 6SS8; 6SS9; 6SSA; 8ZB9; 8ZBA

1 entry

Youcai mosaic virus (YoMV) reference strain

RDRP_YOMV Replicase large subunit (EC 2.7.7.48) (182 kDa protein) [Cleaved into: Replicase small subunit (EC ...

1 entry

Zika virus (ZIKV) reference strain

POLG_ZIKV Genome polyprotein [Cleaved into: Capsid protein C (Capsid protein) (Core protein); Protein prM ...

pdb 5GJ4; 5GPI; 5GXJ; 5JPS; 5JRZ; 5K6K; 5RHG; 5RHH; 5RHI; 5RHJ; 5RHK; 5RHL; 5RHM; 5RHO; 5RHP; 5RHQ; 5RHR; 5RHS; 5RHT; 5RHU; 5RHV; 5RHW; 5RHX; 5RHY; 5T1V; 5TFN; 5TFO; 5TFR; 5TMH; 5U04; 5U0B; 5U0C; 5VI7; 5VIM; 5W41; 5Y4Z; 5YOD; 5YOF; 5Z0R; 5Z0V; 5ZMQ; 5ZMS; 5ZOB; 6ADW; 6ADX; 6ADY; 6JPW; 6KK2; 6KK3; 6KK4; 6KK5; 6KK6; 6KPQ; 6L50; 6MH3; 6UX2; 6WCZ; 6Y3B; 7G9K; 7G9L; 7G9M; 7G9N; 7G9O; 7G9P; 7G9Q; 7G9R; 7G9S; 7G9T; 7G9U; 7G9V; 7G9W; 7G9X; 7G9Y; 7G9Z; 7GA0; 7GA1; 7GA2; 7GA3; 7GA4; 7GA5; 7GA6; 7GA7; 7H1H; 7H1I; 7H1J; 7H1K; 7H1L; 7H1M; 7H1N; 7H1O; 7H1P; 7H1Q; 7H1R; 7H1S; 7H1T; 7H1U; 7H1V; 7H1W; 7H1X; 7H1Y; 7H1Z; 7H20; 7H21; 7H22; 7H23; 7H24; 7H25; 7H26; 7H27; 7H28; 7H29; 7H2A; 7H2B; 7H2C; 7H2D; 7H2E; 7H2F; 7H2G; 7H2H; 7H2I; 7H2J; 7H2K; 7H2L; 7H2M; 7H2N; 7H2O; 7H2P; 7H2Q; 7H2R; 7H2S; 7HOJ; 7HOK; 7HOL; 7HOM; 7HOP; 7HOQ; 7HOR; 7HOS; 7HOT; 7HOU; 7HOV; 7HOW; 7HOX; 7HOZ; 7HP0; 7HP1; 7HP2; 7HP4; 7HP5; 7HP6; 7HP7; 7HP8; 7HP9; 7HPA; 7HPB; 7HPC; 7HPD; 7HPE; 7HPF; 7HPG; 7HPH; 7I1K; 7I1L; 7I1M; 7I1N; 7I1O; 7I1P; 7I1Q; 7I1S; 7I1T; 7I1V; 7I1W; 7I1Y; 7I1Z; 7I20; 7I21; 7I22; 7O2M; 7O55; 7OBV; 7OC2; 7PFQ; 7PFY; 7PFZ; 7PG1; 7PGC; 7VLG; 7VLH; 7VLI; 7VXX; 7VXY; 7ZLC; 7ZLD; 7ZMI; 7ZNO; 7ZPD; 7ZQ1; 7ZQF; 7ZTM; 7ZUM; 7ZV4; 7ZVV; 7ZW5; 7ZWK; 7ZYS; 8A15; 8AQA; 8AQB; 8AQK; 8PEM; 8PN6; 8UM3; 8V7R; 8V7U; 8WN8; 8WNP; 8WNU; 8WO0; 8WO4

3 entries

African cassava mosaic virus (isolate West Kenyan 844) (ACMV) (Cassava latent virus (isolate West Kenyan 844))

Select_allDeselect_all
TRAP_CLVK Transcriptional activator protein (TrAP) (15.2 kDa protein) (Protein AC2) (Protein AL2)
AC4_CLVK Protein AC4 (Protein AL4)
AV2_CLVK Protein AV2

3 entries

Indian cassava mosaic virus (ICMV)

Select_allDeselect_all
TRAP_ICMV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_ICMV Protein AC4 (Protein AL4)
AV2_ICMV Protein AV2

3 entries

Reston ebolavirus (strain Philippines-96) (REBOV) (Reston Ebola virus)

Select_allDeselect_all
VP30_EBORE Transcriptional activator VP30 (EbolaVP30) (eVP30) (Minor nucleoprotein VP30)
VP40_EBORE Matrix protein VP40 (Ebola VP40) (eVP40) (Membrane-associated protein VP40)
VP35_EBORE Polymerase cofactor VP35

3 entries

Reston ebolavirus (strain Reston-89) (REBOV) (Reston Ebola virus)

Select_allDeselect_all
VP35_EBORR Polymerase cofactor VP35

pdb 3KS4; 3KS8; 3L2A; 4LG2; 6GBQ; 6GBR

VP30_EBORR Transcriptional activator VP30 (EbolaVP30) (eVP30) (Minor nucleoprotein VP30)

pdb 3V7O

VP40_EBORR Matrix protein VP40 (Ebola VP40) (eVP40) (Membrane-associated protein VP40)

3 entries

Sudan ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV) (Sudan Ebola virus)

Select_allDeselect_all
VP35_EBOSU Polymerase cofactor VP35

pdb 6OAF

VP30_EBOSU Transcriptional activator VP30 (EbolaVP30) (eVP30) (Minor nucleoprotein VP30)
VP40_EBOSU Matrix protein VP40 (Ebola VP40) (eVP40) (Membrane-associated protein VP40)

pdb 4LD8; 8AYT; 8AYU; 8B1O; 8B1P; 8B1S; 8B2U; 8B3X

3 entries

Tomato yellow leaf curl Sardinia virus (isolate Spain-1) (TYLCSV)

Select_allDeselect_all
TRAP_TYCS1 Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AC4_TYCS1 Protein C4 (10.9 kDa protein) (Protein L4)
AV2_TYCS1 Protein V2

3 entries

Tomato yellow leaf curl Sardinia virus (isolate Spain-2) (TYLCSV)

Select_allDeselect_all
TRAP_TYCS2 Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AC4_TYCS2 Protein C4 (10.9 kDa protein) (Protein L4)
AV2_TYCS2 Protein V2

3 entries

Zaire ebolavirus (strain Kikwit-95) (ZEBOV) (Zaire Ebola virus)

Select_allDeselect_all
VP30_EBOZ5 Transcriptional activator VP30 (EbolaVP30) (eVP30) (Minor nucleoprotein VP30)

pdb 2I8B; 5VAO; 5VAP; 6E5X

VP35_EBOZ5 Polymerase cofactor VP35 (Ebola VP35) (eVP35)

pdb 5BPV; 7D35

VP40_EBOZ5 Matrix protein VP40 (Ebola VP40) (eVP40) (Membrane-associated protein VP40)

pdb 1ES6; 8YHV

2 entries

Bean common mosaic necrosis virus (strain NL-3) (BCMNV) (Bean common mosaic virus serotype A (strain NL-3))

Select_allDeselect_all
POLG_BCMNN Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_BCMNN P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Bean yellow mosaic virus

Select_allDeselect_all
POLG_BYMV Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_BYMV P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Beet mosaic virus (BtMV)

Select_allDeselect_all
POLG_BTMV Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_BTMV P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Cabbage leaf curl virus (isolate Jamaica) (CaLCuV)

Select_allDeselect_all
TRAP_CALCV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_CALCV Protein AC4 (Protein AL4)

2 entries

Chrysanthemum virus B (CVB)

Select_allDeselect_all
TGB1_CVB Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...
VSR_CVB RNA silencing suppressor (12.6 kDa protein) (Putative nucleic acid-binding protein)

2 entries

Lettuce mosaic virus (strain 0 / isolate French) (LMV)

Select_allDeselect_all
POLG_LMV0 Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_LMV0 P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Lettuce mosaic virus (strain E) (LMV)

Select_allDeselect_all
POLG_LMVE Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...
MVP_LMVE P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Lily symptomless virus (LSV)

Select_allDeselect_all
TGB1_LSV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...
VSR_LSV RNA silencing suppressor (16 kDa protein) (ORF6 protein) (Putative nucleic acid-binding protein)

2 entries

Papaya ringspot virus (strain P / mutant HA)

Select_allDeselect_all
POLG_PRSVH Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...
MVP_PRSVH P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Pea seed-borne mosaic virus (strain DPD1)

Select_allDeselect_all
POLG_PSBMV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...
MVP_PSBMV P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Peanut mottle virus (strain M)

Select_allDeselect_all
POLG_PEMVM Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PEMVM P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Pepper mottle virus (isolate California) (PeMV) (PepMoV C)

Select_allDeselect_all
POLG_PEMVC Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PEMVC P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Plum pox potyvirus (isolate NAT) (PPV)

Select_allDeselect_all
POLG_PPVNA Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PPVNA P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Plum pox potyvirus (strain D) (PPV)

Select_allDeselect_all
POLG_PPVD Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PPVD P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Plum pox potyvirus (strain SK 68) (PPV)

Select_allDeselect_all
POLG_PPVSK Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PPVSK P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Poplar mosaic virus (isolate ATCC Pv275) (PMV)

Select_allDeselect_all
TGB1_POPMV Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...
VSR_POPMV RNA silencing suppressor (14 kDa protein) (Putative nucleic acid-binding protein)

2 entries

Potato virus A (PVA)

Select_allDeselect_all
POLG_PVMA Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PVMA P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Potato virus S (strain Peruvian)

Select_allDeselect_all
TGB1_PVSP Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...
VSR_PVSP RNA silencing suppressor (10.7 kDa protein) (Putative nucleic acid-binding protein)

2 entries

Potato virus Y (strain Hungarian) (PVY)

Select_allDeselect_all
POLG_PVYHU Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_PVYHU P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Soybean mosaic virus (strain G2) (SMV)

Select_allDeselect_all
POLG_SBMVG Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_SBMVG P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Tobacco etch virus (TEV)

Select_allDeselect_all
POLG_TEV Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

pdb 1LVB; 1LVM; 1Q31; 6SUQ

MVP_TEV P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Tobacco vein mottling virus (TVMV)

Select_allDeselect_all
POLG_TVMV Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

pdb 3MMG

MVP_TVMV P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Turnip mosaic virus (strain Quebec) (TuMV)

Select_allDeselect_all
POLG_TUMVQ Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...
MVP_TUMVQ P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Zucchini yellow mosaic virus (strain California) (ZYMV)

Select_allDeselect_all
POLG_ZYMVC Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_ZYMVC P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Zucchini yellow mosaic virus (strain Reunion Island) (ZYMV)

Select_allDeselect_all
POLG_ZYMVR Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...
MVP_ZYMVR P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

2 entries

Zucchini yellow mosaic virus (strain Singapore) (ZYMV)

Select_allDeselect_all
POLG_ZYMVS Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...
MVP_ZYMVS P3N-PIPO polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (N-terminal protein) (P1 proteinase); ...

1 entry

Alkhumra hemorrhagic fever virus (ALKV) (Alkhurma hemorrhagic fever virus)

POLG_ALKV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Andean potato mottle virus (APMV)

POL2_APMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Apple chlorotic leaf spot virus (isolate apple) (ACLSV)

MP_ACLSA Putative movement protein (50.4 kDa protein) (ORF2 protein)

1 entry

Artichoke mottled crinkle virus (AMCV)

P19_AMCV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Banzi virus (BANV)

POLG_BANV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Bean-pod mottle virus (strain Kentucky G7) (BPMV)

POL2_BPMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

pdb 1BMV; 1PGL; 1PGW

1 entry

Black beetle virus (BBV)

B2_BBV Protein B2

1 entry

Boolarra virus (BoV)

B2_BOOLV Protein B2

1 entry

Broad bean wilt virus 2 (BBWV-2)

POL2_BBWV2 RNA2 polyprotein (119kDa protein) (Genome polyprotein M) [Cleaved into: VP53 (53 kDa protein); ...

1 entry

Bussuquara virus (BUSV)

POLG_BUSV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Carnation Italian ringspot virus (CIRV)

P19_CIRV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

pdb 1RPU; 6BJG; 6BJH; 6BJV

1 entry

Carnation latent virus (CLV)

VSR_CLV RNA silencing suppressor (11.6 kDa protein) (Putative nucleic acid-binding protein)

1 entry

Cowpea severe mosaic virus (strain DG) (CPSMV)

POL2_CPSMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Cryphonectria hypovirus 1 (strain Euro7) (CHV-1/Euro7) (Chestnut blight fungus hypovirulence-associated virus)

POLA_CHPVU Polyprotein p69 (ORFA polyprotein) [Cleaved into: Papain-like protease p29 (EC 3.4.22.-); p40 ...

1 entry

Cucumber mosaic virus (strain Q) (CMV)

2B_CMVQ Suppressor of silencing 2b (Protein 2b)

1 entry

Cucumber necrosis virus (CNV)

P19_CNV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Cymbidium ringspot virus (CymRSV)

P19_CRV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Dengue virus type 1 (strain Singapore/S275/1990) (DENV-1)

POLG_DEN1S Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 3L6P; 3LKW

1 entry

Dengue virus type 2 (isolate Thailand/0168/1979) (DENV-2)

POLG_DEN28 Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 1P58; 2M9P; 2M9Q; 3C6D

1 entry

Dengue virus type 2 (strain 16681-PDK53) (DENV-2)

POLG_DEN27 Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2R29; 3EVG; 6FLA

1 entry

Dengue virus type 2 (strain Jamaica/1409/1983) (DENV-2)

POLG_DEN2J Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 3UZV; 6VG5; 6VSO

1 entry

Dengue virus type 2 (strain Peru/IQT2913/1996) (DENV-2)

POLG_DEN2Q Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 3IXY

1 entry

Dengue virus type 2 (strain Puerto Rico/PR159-S1/1969) (DENV-2)

POLG_DEN2P Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 1L9K; 1OAN; 1OK8; 1OKE; 1P58; 1R6A; 1R6R; 1THD; 2P1D; 2P3L; 2P3O; 2P3Q; 2P40; 2P41; 3J8D; 3ZKO; 4M9F; 4M9I; 4M9K; 4M9M; 4M9T; 5HHG

1 entry

Dengue virus type 2 (strain Thailand/16681/1984) (DENV-2)

POLG_DEN26 Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2R69; 4O6B; 6WER; 6WY1; 6ZQU; 7K93

1 entry

Dengue virus type 2 (strain Thailand/NGS-C/1944) (DENV-2)

POLG_DEN2N Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 3IYA; 3J27; 3J2P; 4CBF; 4UIH; 6FLA; 6FLB; 6FLC; 6IZX; 6IZY; 9DOF; 9DOG; 9DTT

1 entry

Dengue virus type 3 (strain China/80-2/1980) (DENV-3)

POLG_DEN3C Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Dengue virus type 3 (strain Martinique/1243/1999) (DENV-3)

POLG_DEN3M Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Dengue virus type 3 (strain Philippines/H87/1956) (DENV-3)

POLG_DEN3P Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 1UZG; 2J7U; 2J7W; 3P8Z; 3P97; 3UZE; 3VTT; 5CCV; 5E9Q; 5EC8; 5EHG; 5EHI; 5EIF; 5EIW; 5EKX; 7A3S; 7A3T

1 entry

Dengue virus type 3 (strain Singapore/8120/1995) (DENV-3)

POLG_DEN3I Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 3U1I; 3U1J; 4CTJ; 4CTK; 4V0Q; 4V0R

1 entry

Dengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)

POLG_DEN3S Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2J7U; 2J7W; 3VWS; 4C11; 4HHJ; 5DTO; 5EIW; 5F3T; 5F3Z; 5F41; 5HMW; 5HMX; 5HMY; 5HMZ; 5HN0; 5I3P; 5I3Q; 5IQ6; 5JJR; 5JJS; 5WJN; 5WKH; 6H80; 6H9R; 6XD0; 6XD1

1 entry

Dengue virus type 4 (strain Dominica/814669/1981) (DENV-4)

POLG_DEN4D Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2H0P; 3UAJ; 3UC0; 3WE1; 4X42; 5B1C; 7A3Q

1 entry

Dengue virus type 4 (strain Philippines/H241/1956) (DENV-4)

POLG_DEN4P Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 4AM0; 7VMV; 8WBB; 8WBC; 8WBD; 8WBE

1 entry

Dengue virus type 4 (strain Singapore/8976/1995) (DENV-4)

POLG_DEN4S Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Dengue virus type 4 (strain Thailand/0348/1991) (DENV-4)

POLG_DEN4T Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2JLQ; 2JLR; 2JLS; 2JLU; 2JLV; 2JLW; 2JLX; 2JLY; 2JLZ; 2WHX; 2WZQ; 3UYP; 5YVV; 5YVW

1 entry

Dengue virus type 4 (strain Thailand/0476/1997) (DENV-4)

POLG_DEN4H Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Drosophila C virus (strain EB) (DCV)

POLN_DCVEB Replicase polyprotein [Cleaved into: Protein 1A; Protein 2A; Protein 2B; Protein 2C; Protein 3A; ...

1 entry

Edge Hill virus (EHV)

POLG_EHV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Flock house virus (FHV)

B2_FHV Protein B2

pdb 2AZ0; 2AZ2; 2B9Z

1 entry

Havel river virus (HaRV)

P19_HARV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Helenium virus S (HelVS)

VSR_HELVS RNA silencing suppressor (12.6 kDa protein) (Putative nucleic acid-binding protein)

1 entry

Ilheus virus (ILHV)

POLG_ILHV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 7WD4

1 entry

Japanese encephalitis virus (strain Jaoars982) (JEV)

POLG_JAEVJ Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 5YWO; 5YWP

1 entry

Japanese encephalitis virus (strain M28) (JEV)

POLG_JAEVM Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Japanese encephalitis virus (strain SA(v)) (JEV)

POLG_JAEV5 Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Japanese encephalitis virus (strain SA-14) (JEV)

POLG_JAEV1 Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2Z83; 3P54; 4HDG; 4HDH; 4K6M; 4MTP; 5MV1; 5MV2; 5O19; 5O36; 5OW2; 5WSN; 5YWO; 5YWP

1 entry

Kokobera virus (KOKV)

POLG_KOKV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2V6I; 2V6J

1 entry

Kunjin virus (strain MRM61C)

POLG_KUNJM Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 1SFK; 2HCN; 2HCS; 2HFZ; 2OF6; 2QEQ

1 entry

Kyasanur forest disease virus (KFDV)

POLG_KFDV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 7V4Q; 7V4R

1 entry

Langat virus (strain TP21)

POLG_LANVT Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 1Z66; 2GG1; 7WNJ; 8YNJ; 9FK0; 9H28

1 entry

Lily virus X

TGB1_LVX Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Louping ill virus (Li)

POLG_LIV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 6J5C

1 entry

Maize stripe virus (MStV)

VSR_MSTV Suppressor of RNA silencing p3 (Protein NS3) (Protein p3)

1 entry

Murray valley encephalitis virus (strain MVE-1-51) (MVEV)

POLG_MVEV5 Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 2PX2; 2PX4; 2PX5; 2PX8; 2PXA; 2PXC; 2V8O; 2WV9

1 entry

Odontoglossum ringspot virus (isolate Korean Cy) (ORSV-Cy)

RDRP_ORSVC Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Odontoglossum ringspot virus (isolate Singapore 1) (ORSV)

RDRP_ORSVS Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Omsk hemorrhagic fever virus (OHFV)

POLG_OHFV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Pear latent virus (PeLV)

P19_PLV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Pelargonium necrotic spot virus (PeNSV)

P19_PENSV RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Pepper mild mottle virus (strain Japan) (PMMV-J)

RDRP_PMMVJ Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Pepper mild mottle virus (strain Spain) (PMMV-S)

RDRP_PMMVS Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Plum pox potyvirus (strain Rankovic) (PPV)

POLG_PPVRA Genome polyprotein [Cleaved into: P1 protease (EC 3.4.21.-) (Leader protease P1) (N-terminal ...

1 entry

Potato leafroll virus (strain Potato/Netherlands/Wageningen/1989) (PLrV)

P0_PLRVW Suppressor of silencing P0 (28 kDa protein) (Protein ORF0)

1 entry

Potato virus M (strain German) (PVM)

VSR_PVMG RNA silencing suppressor (12 kDa protein) (Cysteine-rich protein) (CRP) (Nucleic acid-binding ...

1 entry

Potato virus X (PVX)

TGB1_PVX Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Potato virus X (strain CP) (PVX)

TGB1_PVXCP Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Potato virus X (strain HB) (PVX)

TGB1_PVXHB Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Red clover mottle virus (RCMV)

POL2_RCMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Rice dwarf virus (isolate Akita) (RDV)

VSR_RDVA Suppressor of RNA-mediated gene silencing (Non-structural protein 10) (Pns10)

1 entry

Rice dwarf virus (isolate O) (RDV)

VSR_RDVO Suppressor of RNA-mediated gene silencing (Non-structural protein 10) (Pns10)

1 entry

Rice hoja blanca virus (strain cr) (RHBV) (Rice hoja blanca virus (strain Costa Rica))

VSR_RHBVC Suppressor of RNA silencing p3 (Protein NS3) (Protein p3)

pdb 3AJF

1 entry

Rice stripe virus (isolate M) (RSV)

VSR_RSVM Suppressor of RNA silencing p3 (Protein NS3) (Protein p3)

1 entry

Rocio virus (ROCV)

POLG_ROCV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Squash mosaic virus (strain melon) (SqMV)

POL2_SQMVM RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Tick-borne encephalitis virus (strain Hypr) (TBEV)

POLG_TBEVH Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 5O6A; 5O6V; 7JNO; 7QS9; 7QSA; 8ECH; 8QRH

1 entry

Tick-borne encephalitis virus European subtype (strain Neudoerfl) (NEUV) (Neudoerfl virus)

POLG_TBEVW Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 1N6G; 1NA4; 1SVB; 1URZ; 6J5G; 6S8C; 7BLV; 7BM0; 7LSF; 7LSG; 7NXU; 7OJ4; 7QRE; 7QRF; 7QRG; 7YWQ

1 entry

Tick-borne encephalitis virus Far Eastern subtype (strain Sofjin) (SOFV) (Sofjin virus)

POLG_TBEVS Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 1K4R; 7LSE; 8QRH; 8R2L; 8R8L

1 entry

Tick-borne powassan virus (strain LB) (POWV) (Powassan virus)

POLG_POWVL Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 7SGT

1 entry

Tobacco mild green mosaic virus (TMGMV) (TMV strain U2)

RDRP_TMGMV Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tobacco mosaic virus (strain B935A) (TMV)

RDRP_TMVB Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tobacco mosaic virus (strain Korean NC 82) (TMV)

RDRP_TMVKR Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tobacco mosaic virus (strain Rakkyo) (TMV-R)

RDRP_TMVRA Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tobamovirus Ob

RDRP_TMOB Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tomato brown rugose fruit virus (isolate TOBRFV/Tomato/Jordan/Tom1-Jo/2015) (ToBRFV)

RDRP_TBRFV Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tomato bushy stunt virus (strain A23) (TBSV)

P19_TBSVA RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Tomato bushy stunt virus (strain B8) (TBSV)

P19_TBSV8 RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Tomato bushy stunt virus (strain BS-3) (TBSV)

P19_TBSVB RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Tomato bushy stunt virus (strain Ja6) (TBSV)

P19_TBSVJ RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Tomato bushy stunt virus (strain Ja9) (TBSV)

P19_TBSVK RNA silencing suppressor p19 (19 kDa symptom severity modulator)

pdb 4J39; 4J5V; 4JGN; 4JK0; 4JNX; 4KNQ; 4KQ0; 4KTG

1 entry

Tomato bushy stunt virus (strain type) (TBSV)

P19_TBSVT RNA silencing suppressor p19 (19 kDa symptom severity modulator)

1 entry

Tomato mosaic virus (strain Kazakh K1) (ToMV) (TMV strain K1)

RDRP_TOMK1 Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tomato mosaic virus (strain Kazakh K2) (ToMV) (TMV strain K2)

RDRP_TOMK2 Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tomato mosaic virus (strain L) (ToMV) (TMV strain tomato)

RDRP_TOML Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

pdb 3VKW; 3WRX; 3WRY

1 entry

Tomato mosaic virus (strain S-1) (ToMV)

RDRP_TOMS1 Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Tomato mottle virus (isolate Florida) (ToMoV)

TRAP_TMOV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)

1 entry

Tomato spotted wilt virus (strain Bulgarian L3) (TSWV)

NSS_TSWVL Non-structural protein NS-S

1 entry

Turnip vein-clearing virus (TVCV)

RDRP_TVCV Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) ...

1 entry

Turnip yellow mosaic virus (isolate Australia)

P69_TYMVA 69 kDa protein (p69)

1 entry

Turnip yellow mosaic virus (isolate TYMC)

P69_TYMVC 69 kDa protein (p69)

1 entry

Usutu virus (USUV)

POLG_USUV Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 6A0P; 6S92; 6S93; 6S94; 8B51; 8B52

1 entry

Wesselsbron virus (WSLV)

POLG_WSLV Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

West Nile virus (WNV)

POLG_WNV Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 2FP7; 2GGV; 2IJO; 2P5P; 2YOL; 3E90; 3I50; 5IDK

1 entry

West Nile virus (strain NY-99) (WNV) (West Nile virus (strain NY-1999))

POLG_WNV9 Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide ...

pdb 2OY0; 3I50; 3IYW; 3J0B; 3LKZ; 4O6C; 4O6D; 4OIE; 4OII; 6UTE; 7E4K; 8CO8

1 entry

White clover mosaic virus (strain O) (WCMV)

TGB1_WCMVO Movement and silencing protein TGBp1 (25 kDa protein) (Silencing suppressor P25) (Triple gene block ...

1 entry

Wound tumor virus (WTV)

VSR_WTV Suppressor of RNA-mediated gene silencing (Non-structural protein 10) (Pns10)

1 entry

Yellow fever virus (isolate Angola/14FA/1971) (YFV)

POLG_YEFVN Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 5YXA; 8GPT; 8GPX

1 entry

Yellow fever virus (isolate Ethiopia/Couma/1961) (YFV)

POLG_YEFVE Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Yellow fever virus (isolate Ivory Coast/1999) (YFV)

POLG_YEFVC Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Yellow fever virus (isolate Ivory Coast/85-82H/1982) (YFV)

POLG_YEFVI Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Yellow fever virus (isolate Uganda/A7094A4/1948) (YFV)

POLG_YEFVU Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Yellow fever virus (strain French neurotropic vaccine FNV) (YFV)

POLG_YEFVF Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Yellow fever virus (strain Ghana/Asibi/1927) (YFV)

POLG_YEFVA Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

pdb 2JQM; 2JV6; 6EPK; 8OFN

1 entry

Yellow fever virus (strain Trinidad/TRINID79A/1979) (YFV)

POLG_YEFVT Genome polyprotein [Cleaved into: Capsid protein C (Core protein); Protein prM; Peptide pr; Small ...

1 entry

Zaire ebolavirus (strain Gabon-94) (ZEBOV) (Zaire Ebola virus)

VP40_EBOG4 Matrix protein VP40 (Ebola VP40) (eVP40) (Membrane-associated protein VP40)

1 entry

Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013) (ZIKV)

POLG_ZIKVF Genome polyprotein [Cleaved into: Capsid protein C (Capsid protein) (Core protein); Protein prM ...

pdb 5GOZ; 5GP1; 5H30; 5H32; 5H37; 5IRE; 5IZ7; 5JMT; 5KQR; 5KQS; 5KVE; 5LBS; 5LBV; 5LCV; 5M5B; 5MRK; 5NJU; 5NJV; 5U4W; 5UHY; 5ULP; 5Y0A; 5Y6M; 5Y6N; 6CO8; 6I7P; 6JFH; 6JFI; 6LD1; 6LD2; 6LD3; 6LD4; 6LD5; 6NIP; 6NIU; 6PLK; 6RWZ; 6S0J; 6UM3; 7A3N; 7A3U; 7BSD; 7BU8; 7BUA; 7M1V; 7T17; 7V2Z; 7YAR; 7YW7; 7YW8; 8EE5; 8EE8; 8EED; 8EEE