Bromoviridae (taxid:39740)

VIRION

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Non enveloped, icosahedral or bacilliform 26-35 nm in diameter. Symmetry icosahedral (T = 3, or T = 1). Three genomic and one subgenomic segments are encapsidated in distinct particles, resulting in several different types of virion.
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GENOME

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Segmented, tripartite linear ssRNA(+) genome composed of RNA1, RNA2, RNA3. Each genomic segment has a 3' tRNA-like structure and a 5'cap.

GENE EXPRESSION

Genomic RNAs serve as messenger RNAs. RNA1 and RNA2 encode respectively proteins 1a and 2a, both involved in genome replication and internal transcription of sgRNA4 from the minus-strand copy of RNA3. RNA3 and sgRNA4 are translated respectively into movement and capsid proteins.
Cucumovirus and ilarvirus have an additional overlapping ORF2b.

ENZYMES

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the host cell.
  2. Uncoating, and release of the viral genomic RNA into the cytoplasm.
  3. Expression of protein 1a and 2a to produce replication proteins.
  4. Replication occurs in viral factories made of membrane vesicles derived from the ER (spherules). A dsRNA genome is synthesized from the genomic ssRNA(+).
  5. The dsRNA genome is transcribed/replicated thereby providing viral mRNAs/new ssRNA(+) genomes.
  6. Subgenomic RNA4 is translated producing capsid proteins.
  7. Assembly of new virus particles.
  8. Viral movement protein triggers the formation of tubular structures that mediate virion cell-to-cell transfer via a tubule-guided mechanism.

Host-virus interaction

Suppression of RNA silencing

Cucumovirus (and possibly ilarvirus) protein 2b acts as a suppressor of RNA silencing .

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

109 entries grouped by protein

16 entries

Replication protein 1a

Select_allDeselect_all
1A_AMVLE
Alfalfa mosaic virus (strain 425 / isolate Leiden) reference strain
1A_BMV
Brome mosaic virus (BMV) reference strain
1A_CMVFN
Cucumber mosaic virus (strain FNY) (CMV) reference strain
1A_OLV2I
Olive latent virus 2 (isolate Italy) (OLV-2) reference strain
1A_PZSVT
Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) reference strain
1A_TAV
Tomato aspermy virus (TAV) reference strain
1A_TOBSV
Tobacco streak virus (strain WC) (TSV) reference strain
1A_BBMV
Broad bean mottle virus
1A_CCMV
Cowpea chlorotic mottle virus (CCMV)
1A_CMVII
Cucumber mosaic virus (strain Iizuka) (CMV)
1A_CMVIX
Cucumber mosaic virus (strain Ixora) (CMV)
1A_CMVNT
Cucumber mosaic virus (strain NT9) (CMV)
1A_CMVO
Cucumber mosaic virus (strain O) (CMV)
1A_CMVQ
Cucumber mosaic virus (strain Q) (CMV)
1A_CMVY
Cucumber mosaic virus (strain Y) (CMV)
1A_PSVJ
Peanut stunt virus (strain J) (PSV)

4 entries

Suppressor of silencing 2b (Protein 2b)

Select_allDeselect_all
2B_CMVFN
Cucumber mosaic virus (strain FNY) (CMV) reference strain
2B_TAV
Tomato aspermy virus (TAV) reference strain
2B_TOBSV
Tobacco streak virus (strain WC) (TSV) reference strain
2B_CMVQ
Cucumber mosaic virus (strain Q) (CMV)

39 entries

Capsid protein (CP) (Coat protein)

Select_allDeselect_all
CAPSD_AMVLE
Alfalfa mosaic virus (strain 425 / isolate Leiden) reference strain
CAPSD_BMV
Brome mosaic virus (BMV) reference strain
CAPSD_CMVFN
Cucumber mosaic virus (strain FNY) (CMV) reference strain
CAPSD_OLV2I
Olive latent virus 2 (isolate Italy) (OLV-2) reference strain
CAPSD_PZSVT
Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) reference strain
CAPSD_TAV
Tomato aspermy virus (TAV) reference strain
CAPSD_TOBSV
Tobacco streak virus (strain WC) (TSV) reference strain
CAPSD_AMVMA
Alfalfa mosaic virus (strain 425 / isolate Madison)
CAPSD_AMVST
Alfalfa mosaic virus (strain Strasbourg)
CAPSD_AMVYS
Alfalfa mosaic virus (strain YSMV)
CAPSD_BBMV
Broad bean mottle virus
CAPSD_CCMV
Cowpea chlorotic mottle virus (CCMV)
CAPSD_CMVAS
Cucumber mosaic virus (strain As) (CMV)
CAPSD_CMVBA
Cucumber mosaic virus (strain Banana) (CMV)
CAPSD_CMVC
Cucumber mosaic virus (strain C) (CMV)
CAPSD_CMVC7
Cucumber mosaic virus (strain C7-2) (CMV)
CAPSD_CMVCS
Cucumber mosaic virus (strain CS) (CMV)
CAPSD_CMVDK
Cucumber mosaic virus (strain DKRD) (CMV)
CAPSD_CMVE5
Cucumber mosaic virus (strain E5) (CMV)
CAPSD_CMVFC
Cucumber mosaic virus (strain FC) (CMV)
CAPSD_CMVFT
Cucumber mosaic virus (strain FT) (CMV)
CAPSD_CMVI1
Cucumber mosaic virus (strain I17F) (CMV)
CAPSD_CMVII
Cucumber mosaic virus (strain Iizuka) (CMV)
CAPSD_CMVIX
Cucumber mosaic virus (strain Ixora) (CMV)
CAPSD_CMVKI
Cucumber mosaic virus (strain Kin) (CMV)
CAPSD_CMVKO
Cucumber mosaic virus (strain Kor) (CMV)
CAPSD_CMVM
Cucumber mosaic virus (strain M) (CMV)
CAPSD_CMVM4
Cucumber mosaic virus (strain M48) (CMV)
CAPSD_CMVN
Cucumber mosaic virus (strain N) (CMV)
CAPSD_CMVNT
Cucumber mosaic virus (strain NT9) (CMV)
CAPSD_CMVO
Cucumber mosaic virus (strain O) (CMV)
CAPSD_CMVP6
Cucumber mosaic virus (strain P6) (CMV)
CAPSD_CMVPE
Cucumber mosaic virus (strain Pepo) (CMV)
CAPSD_CMVQ
Cucumber mosaic virus (strain Q) (CMV)
CAPSD_CMVS
Cucumber mosaic virus (strain S) (CMV)
CAPSD_CMVTR
Cucumber mosaic virus (strain Trk7) (CMV)
CAPSD_CMVWL
Cucumber mosaic virus (strain WL) (CMV)
CAPSD_CMVY
Cucumber mosaic virus (strain Y) (CMV)
CAPSD_PSVJ
Peanut stunt virus (strain J) (PSV)

30 entries

Movement protein (MP) (Protein 3A)

Select_allDeselect_all
MVP_AMVLE
Alfalfa mosaic virus (strain 425 / isolate Leiden) reference strain
MVP_BMV
Brome mosaic virus (BMV) reference strain
MVP_CMVFN
Cucumber mosaic virus (strain FNY) (CMV) reference strain
MVP_OLV2I
Olive latent virus 2 (isolate Italy) (OLV-2) reference strain
MVP_PZSVT
Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) reference strain
MVP_TAV
Tomato aspermy virus (TAV) reference strain
MVP_TOBSV
Tobacco streak virus (strain WC) (TSV) reference strain
MVP_AMVMA
Alfalfa mosaic virus (strain 425 / isolate Madison)
MVP_AMVST
Alfalfa mosaic virus (strain Strasbourg)
MVP_AMVYS
Alfalfa mosaic virus (strain YSMV)
MVP_BBMV
Broad bean mottle virus
MVP_CCMV
Cowpea chlorotic mottle virus (CCMV)
MVP_CMVAS
Cucumber mosaic virus (strain As) (CMV)
MVP_CMVC7
Cucumber mosaic virus (strain C7-2) (CMV)
MVP_CMVCS
Cucumber mosaic virus (strain CS) (CMV)
MVP_CMVFT
Cucumber mosaic virus (strain FT) (CMV)
MVP_CMVIX
Cucumber mosaic virus (strain Ixora) (CMV)
MVP_CMVKI
Cucumber mosaic virus (strain Kin) (CMV)
MVP_CMVKO
Cucumber mosaic virus (strain Kor) (CMV)
MVP_CMVM
Cucumber mosaic virus (strain M) (CMV)
MVP_CMVM4
Cucumber mosaic virus (strain M48) (CMV)
MVP_CMVN
Cucumber mosaic virus (strain N) (CMV)
MVP_CMVNT
Cucumber mosaic virus (strain NT9) (CMV)
MVP_CMVO
Cucumber mosaic virus (strain O) (CMV)
MVP_CMVPE
Cucumber mosaic virus (strain Pepo) (CMV)
MVP_CMVQ
Cucumber mosaic virus (strain Q) (CMV)
MVP_CMVS
Cucumber mosaic virus (strain S) (CMV)
MVP_CMVTR
Cucumber mosaic virus (strain Trk7) (CMV)
MVP_CMVY
Cucumber mosaic virus (strain Y) (CMV)
MVP_PSVJ
Peanut stunt virus (strain J) (PSV)

20 entries

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

Select_allDeselect_all
RDRP_AMVLE
Alfalfa mosaic virus (strain 425 / isolate Leiden) reference strain
RDRP_BMV
Brome mosaic virus (BMV) reference strain
RDRP_CMVFN
Cucumber mosaic virus (strain FNY) (CMV) reference strain
RDRP_OLV2I
Olive latent virus 2 (isolate Italy) (OLV-2) reference strain
RDRP_PZSVT
Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) reference strain
RDRP_TAV
Tomato aspermy virus (TAV) reference strain
RDRP_TOBSV
Tobacco streak virus (strain WC) (TSV) reference strain

RNA-directed RNA polymerase 2a (2a pol) (EC 2.7.7.48) (2a polymerase)

RDRP_BBMV
Broad bean mottle virus
RDRP_CCMV
Cowpea chlorotic mottle virus (CCMV)
RDRP_CMVAS
Cucumber mosaic virus (strain As) (CMV)
RDRP_CMVB
Cucumber mosaic virus (strain B) (CMV)
RDRP_CMVII
Cucumber mosaic virus (strain Iizuka) (CMV)
RDRP_CMVIX
Cucumber mosaic virus (strain Ixora) (CMV)
RDRP_CMVK
Cucumber mosaic virus (strain K) (CMV)
RDRP_CMVKO
Cucumber mosaic virus (strain Kor) (CMV)
RDRP_CMVMB
Cucumber mosaic virus (strain MB-8) (CMV)
RDRP_CMVNT
Cucumber mosaic virus (strain NT9) (CMV)
RDRP_CMVQ
Cucumber mosaic virus (strain Q) (CMV)
RDRP_CMVY
Cucumber mosaic virus (strain Y) (CMV)
RDRP_PSVJ
Peanut stunt virus (strain J) (PSV)
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Anulavirus ALMMV taxid:1195163

Protein ModelArchive
Coat protein ma-jd-viral-28015
Movement protein (Protein 3A) ma-jd-viral-27080
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19735
Replication protein 1a ma-jd-viral-38445

Blackberry chlorotic ringspot virus taxid:339420

Protein ModelArchive
Coat protein ma-jd-viral-27553
Movement protein (Protein 3A) ma-jd-viral-27846
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19122
Replication protein 1a ma-jd-viral-38461
p2b protein ma-jd-viral-43705

Blueberry shock virus taxid:747056

Protein ModelArchive
Coat protein ma-jd-viral-27835
Movement protein (Protein 3A) ma-jd-viral-28740
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19217
Replication protein 1a ma-jd-viral-38437

Cassava Ivorian bacilliform virus taxid:1464778

Protein ModelArchive
Movement protein (Protein 3A) ma-jd-viral-27083
Putative coat protein ma-jd-viral-28016
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19738
Replication protein 1a ma-jd-viral-38451

Citrus leaf rugose virus taxid:37126

Protein ModelArchive
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19248

Elm mottle virus taxid:56486

Protein ModelArchive
Coat protein ma-jd-viral-27907
Movement protein (Protein 3A) ma-jd-viral-28445
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19249
Replication protein 1a ma-jd-viral-38470

Fragaria chiloensis latent virus taxid:255238

Protein ModelArchive
Coat protein ma-jd-viral-28956
Movement protein (Protein 3A) ma-jd-viral-27918
ORF 3 ma-jd-viral-48155
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19220
Replication protein 1a ma-jd-viral-38476
Secreted protein ma-jd-viral-31942

Gayfeather mild mottle virus taxid:578305

Protein ModelArchive
2b protein ma-jd-viral-30814
Capsid protein (CP) (Coat protein) ma-jd-viral-28639
Movement protein (Protein 3A) ma-jd-viral-27081
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19737
Replication protein 1a ma-jd-viral-38481

Ilarvirus AGLV taxid:1386090

Protein ModelArchive
2b protein ma-jd-viral-43708
Coat protein ma-jd-viral-27550
Movement protein (Protein 3A) ma-jd-viral-27844
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19121
Replication protein 1a ma-jd-viral-38456

Ilarvirus ApMV taxid:12319

Protein ModelArchive
Coat protein ma-jd-viral-27837
Movement protein (Protein 3A) ma-jd-viral-28738

Lilac leaf chlorosis virus taxid:722755

Protein ModelArchive
Coat protein ma-jd-viral-27834
Movement protein (Protein 3A) ma-jd-viral-28741
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19219
Replication protein 1a ma-jd-viral-38468

Olive latent virus 2 (isolate Italy) taxid:650489

Protein ModelArchive
RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48) ma-jd-viral-18927
Replication protein 1a ma-jd-viral-38450

Parietaria mottle virus taxid:64958

Protein ModelArchive
Coat protein ma-jd-viral-27551
Movement protein (Protein 3A) ma-jd-viral-27847

Peanut stunt virus taxid:12313

Protein ModelArchive
Capsid protein (CP) (Coat protein) ma-jd-viral-28640
Movement protein (Protein 3A) ma-jd-viral-27084
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19736
Replication protein 1a ma-jd-viral-38446

Pelargonium zonate spot virus (isolate Tomato/Italy/1982) taxid:650488

Protein ModelArchive
Capsid protein (CP) (Coat protein) ma-jd-viral-49795
Movement protein (MP) (Protein 3A) ma-jd-viral-27082
RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48) ma-jd-viral-19734
Replication protein 1a ma-jd-viral-38442

Privet ringspot virus taxid:2169960

Protein ModelArchive
2b protein ma-jd-viral-43706
Coat protein ma-jd-viral-27552
Movement protein (Protein 3A) ma-jd-viral-27845
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19124
Replication protein 1a ma-jd-viral-38474

Prune dwarf virus taxid:33760

Protein ModelArchive
Replication protein 1a ma-jd-viral-38472

Prunus necrotic ringspot virus taxid:37733

Protein ModelArchive
Coat protein ma-jd-viral-27833
Movement protein (Protein 3A) ma-jd-viral-28742

Spinach latent virus taxid:42680

Protein ModelArchive
Movement protein (Protein 3A) ma-jd-viral-28444
Putative 2b protein ma-jd-viral-44391
Putative coat protein ma-jd-viral-27908
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19250
Replication protein 1a ma-jd-viral-38475

Strawberry necrotic shock virus taxid:243563

Protein ModelArchive
2b protein ma-jd-viral-43707
RNA-directed RNA polymerase 2a (EC 2.7.7.48) ma-jd-viral-19125

Tobacco streak virus (strain WC) taxid:12318

Protein ModelArchive
RNA-directed RNA polymerase 2a (2a pol) (EC 2.7.7.48) (2a polymerase) ma-jd-viral-19123
Suppressor of silencing 2b (Protein 2b) ma-jd-viral-43710