Cell-type capping

(RNA TPase=RNA triphosphatase, RdRp=RNA-dependent RNA polymerase, GTase=guanylyltransferase, MTase=methyltransferase, SAM= S-adenosylmethionine, SAH= S-adenosylhomocysteine)
Enzymatic reactions RNA triphosphatase: Rhea 67004 Guanylyl transfer on viral RNA: Rhea 67012 N7 Methyltransferase: Rhea 67008 2'O Methyltransferase: Rhea 67020
virus | RNA TPaseRhea 67004 | GTaseRhea 67012 | N7MTaseRhea 67008 | 2'O methylaseRhea 67020 |
---|---|---|---|---|
Host metazoan | RNGTT: CysPhos-TPase | RNGTT(GTase-Lys-GMP) | RMNT (Ross) | CMTR1 |
Iridovirus | ORF064L: CysPhos-TPase | ORF064L(GTase-Lys-GMP) | 235L? | 235L? |
Baculovirus | LEF-4: TTM-TPase | LEF-4 (GTase-Lys-GMP) | Unknown | Ac69 |
PTP/BVP: CysPhos-TPase | ||||
Vaccinia (Poxvirus) | D1R: TTM-TPase | D1R (GTase-Lys-GMP) | D1R +D12L | J3R/VP39 |
Orthoflavivirus (Dengue virus) | NS3: Flavi-TPase![]() | NS5 + SLA RNA ![]() ![]() | NS5 + SLA RNA ![]() | NS5 + SLA RNA ![]() |
Mammalian orthoreovirus | Mu2? ![]() ![]() | Lambda2(GTase-Lys-GMP) | Lambda2 | Lambda2 |
Orbivirus(Bluetongue virus) | VP4: ![]() | VP4 (GTase-Lys-GMP) ![]() | VP4 ![]() | VP4 ![]() |
Host protozoan, fungi | CET1: TTM-TPase | CEG1(GTase-Lys-GMP) | ABD1 | None |
Chlorellavirus | A449R: TTM-TPase | A103R (GTase-Lys-GMP) | Unknown | None? |
Mimivirus | MimiCE: TTM-TPase ![]() | MimiCE (GTase-Lys-GMP) | MimiCE | None |
Mimivirus TPase | Paramecium bursaria chlorella virus (PBCV-1) GTase in complex with cap analog GPPPG | Vaccinia methyltransferase OPG102 complexed with M7G capped RNA hexamer. |
Conventional and unconventional mechanisms for capping viral mRNA
Etienne Decroly, Francois Ferron, Julien Lescar, Bruno Canard.
Nat Rev Microbiol. 2011 Dec 5;10(1):51-65
Characterization of a trifunctional mimivirus mRNA capping enzyme and crystal structure of the RNA triphosphatase domain
Delphine Benarroch, Paul Smith, Stewart Shuman
Structure. 2008 Apr;16(4):501-12
Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct
Hengxia Jia, Yao Zhong, Chao Peng and Peng Gong
J Virol. 2022 Jul; 96(14)
Bluetongue virus VP4 is an RNA-capping assembly line
Geoff Sutton 1, Jonathan M Grimes, David I Stuart, Polly Roy
Nat Struct Mol Biol. 2007 May;14(5):449-51.
Nucleoside and RNA triphosphatase activities of orthoreovirus transcriptase cofactor mu2
Jonghwa Kim 1, John S L Parker, Kenneth E Murray, Max L Nibert
J Biol Chem. 2004 Feb 6;279(6):4394-403.
Characterization of the reovirus lambda1 protein RNA 5'-triphosphatase activity
M Bisaillon, G Lemay
J Biol Chem. 1997 Nov 21;272(47):29954-7.
The flavivirus NS5 protein is a true RNA guanylyltransferase that catalyzes a two-step reaction to form the RNA cap structure
Moheshwarnath Issur, Brian J Geiss, Isabelle Bougie, Fr?d?ric Picard-Jean, Simon Despins, Joannie Mayette, Sarah E Hobdey, Martin Bisaillon
RNA. 2009 Dec;15(12):2340-50.
The NS 3 nonstructural protein of flaviviruses contains an RNA triphosphatase activity
G Wengler, G Wengler
Structures of dengue virus RNA replicase complexes
Takuo Osawa , Mari Aoki , Haruhiko Ehara , Shun-Ichi Sekine
Mol Cell. 2023 Aug 3;83(15):2781-2791.e4.